Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07808 ATGATAGCTATGCAGCAAACTGCGTCGACGCAGCAACAACACTACATGGCCAATAATATTCCCATTGGAATGGGAGAAGGTGACCATGTTAATCATCATCAAGTTGATCAGGAAAGTGGTTTTGTTGTTGGGAAGAGATGGTGGATCGGGCCGAGGGCGAGTCAAGGTCCATCGACTTTGATGAAAGAGAGATTAGTAGTTGCTGTTGGTTACTTAAAAGAGTACACAAAGAACTCTTTCAACAACATACTTATTCACATATGGGTGCCTGTTCTAAGGAGGAGATCAGCAATTCAATATCTGCAGCAGGATTCCAGTTCATCTGTTCCGATTTCTGTGAATCCAAACATGAATGTTCATGTTCGATTCTTTAGAAGCCACGAGTATCCGCGACATCAGCAACAGAAGCAACAATATGGTTCTCTTTTAGCATTTCCTGTGTTCGAAAGAGGAAGTGGAACATGTCTAGGTGTCATTGAGTTTGTTATCGCCAATCAAAACCTCATCAATTATCGTCCACAACTCGATCATCTCTCCAATGCTCCCGAGGCTGTTGATTTTAGAAGTAGCCACAACATGAATATTCCACCAGCAGTAAAGGTAAGGATGCATTCCATCATTCATCAAATCAATACTAGATTCAATTCTTGA 651 0.4147 MIAMQQTASTQQQHYMANNIPIGMGEGDHVNHHQVDQESGFVVGKRWWIGPRASQGPSTLMKERLVVAVGYLKEYTKNSFNNILIHIWVPVLRRRSAIQYLQQDSSSSVPISVNPNMNVHVRFFRSHEYPRHQQQKQQYGSLLAFPVFERGSGTCLGVIEFVIANQNLINYRPQLDHLSNAPEAVDFRSSHNMNIPPAVKVRMHSIIHQINTRFNS 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07808 216 PANTHER PROTEIN NLP8 38 191 IPR045012 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07808 Vivi-Chr1 212751772 212752826 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07808 43 205 NLP Transcription Factor Family AT2G17150 36.869 3.78e-32 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07808 - - vvo:131644857 438.343