Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07787 ATGGCTGATCATTCATCAAGCAATGGAAACCATGAAATTGCTATGAATGTAAATGGTGATTCCTCCAAAAATTGTGAAGATAACTCAGAATATAAAGACTATGTGCCTCTTTTGCAAAAGTTGGTGGCAGAATTGGTGGGGACATACTTCTTGATATTTGCAGGATGTGCTGCTGTTGTTGTAAACCTTGACAATGACAAAGTGGTAACACATCCTGGGATTTCAATTGTTTGGGGCCTCACTGTTATGGTTTTGGTTTATTCTCTCGGTCACATCTCTGGTGCTCATTTTAATCCTGCGGTCACCATCGCTCACGCGTCAACCAAAAGATTTCCCCTTAAAGAGGTGCCAGCTTATTTGATAGCACAAGTTCTTGGATCCACTCTTGCAAGTGGAACACTTAGACTTATATTCAATGGTAATAAAGATCATTTTTCCGGAACACTTCCGGCTGGTTCTGATCTTCAGGCATTTGTGGTTGAATTCATAATCACTTTTTATCTTATGTTCATTATCTCTGGAGTTGCCACGGATAATAGAGCGATCGGTGAATTGGCTGGACTTGCAGTTGGATCTACGGTACTTCTAAATGTCATGTTTGCCGGGTTCAGAAGAGTAGTTGCTTGA 627 0.4083 MADHSSSNGNHEIAMNVNGDSSKNCEDNSEYKDYVPLLQKLVAELVGTYFLIFAGCAAVVVNLDNDKVVTHPGISIVWGLTVMVLVYSLGHISGAHFNPAVTIAHASTKRFPLKEVPAYLIAQVLGSTLASGTLRLIFNGNKDHFSGTLPAGSDLQAFVVEFIITFYLMFIISGVATDNRAIGELAGLAVGSTVLLNVMFAGFRRVVA 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07787 208 MobiDBLite consensus disorder prediction 1 21 - -
Vivi1g07787 208 SUPERFAMILY Aquaporin-like 35 203 IPR023271 -
Vivi1g07787 208 Gene3D Glycerol uptake facilitator protein. 2 204 IPR023271 -
Vivi1g07787 208 Pfam Major intrinsic protein 36 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi1g07787 208 PRINTS Major intrinsic protein family signature 78 102 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi1g07787 208 PRINTS Major intrinsic protein family signature 160 178 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi1g07787 208 PRINTS Major intrinsic protein family signature 115 134 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi1g07787 208 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi1g07787 208 ProSitePatterns MIP family signature. 96 104 IPR022357 -
Vivi1g07787 208 PANTHER AQUAPORIN NIP2-1 16 202 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07787 Vivi-Chr1 211400178 211407041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07787 35 202 Major Intrinsic Protein MIP AT4G18910 77.143 1.18e-92 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07787 K09874 - gmx:100786924 343.584