Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07747 ATGGAATCGAAAAACCCTACTAGGTTTAAGCTTGGGAAACAGTCGTCGTTAGCACCGGAACGAGATAGGGAAGAGGATGAAGTTCATCATGAGGGTGATGCTACTATTGATTCTGGAGTTAGGTTGATGTATTCGGCGAATGAAGGTGATGTTGATGGGATTCGTGAGGTGTTGGAGTCTGGTGTGAGTGTGAATTTTAGGGATGTTGATGGACGTACTGCTCTTCATATTGCGGCTTGTCAGGGGTTGACACATGTTGTTGATTTGTTGCTTGATAAAGGGGCTGATGTTGATCCTAAAGATCGATGGGGGAGCACGCCACTTGCAGATGCTATATTCTATAAAAACAACGACGTGATCAAACTATTGGAGAATCATGGAGCAAAGCCTCTGATGACCTCTATGCATGTTGATCATGCACGTGAAGTCCCGGAATATGAAATCGATCCTAAAGAACTTGATTTTACCAACAGTAAGGAAATAACAAAGGGAACTTTCTGTATTGCGTTGTGGCGTGGGATCGAGGTTGCGGTAAAAAAGCTCGGGGAAGACGTCATAATTAATGAGGAGAAAGTGAAGGCTTTCAGAGATGAGCTTGCTCTGTTCCAGAAGATTCGTCATCCAAATGTAGTCCAATTTCTTGGTGCTGTGACTCAGAGTAGTCCAATGATGATTGTGACAGAATATCTTCCCAAGGGAGATCTTCGTGATTTCATGAAAAGAAAAGGAGCTTTAAAACCAAGTACAGCTGTTAGATTTGCACTTGATATTGCTAGGGGAGTGGGTTATTTGCATGAAAATAAGCCATCACCCATTATTCACCGTGATCTCGAGCCTTCTAATATATTGCGGGATGATTCCGGCCACCTAAAAGTTGCAGACTTTGGAGTTAGCAAGTTGCTAGCAGTTAAAGAAGACAAGCCTCTAACTTGCCAAGATACTTCTTGCCGCTATGTGGCCCCTGAGGTTTTTAATCAAGAGGAATATGACACTAAAGTGGATGTGTTCTCATCAGAGTTATCATTCCCGACCGCGACGGCCCCTATAGCGGCGCGGCCCCCACCCGCGCGAAATGCAGGGTGCGGTGGCAGAGATGGTGTAGCAGACGCTACAGGCGCTTTCTCGGGTCGCGGATCGCGGGGTTTTCCCGGGCGGAGCAGCTCCGGGTTTAAAAGTGTGGTGCATCTGTTTCGTTTCGGTTTATAA 1206 0.4585 MESKNPTRFKLGKQSSLAPERDREEDEVHHEGDATIDSGVRLMYSANEGDVDGIREVLESGVSVNFRDVDGRTALHIAACQGLTHVVDLLLDKGADVDPKDRWGSTPLADAIFYKNNDVIKLLENHGAKPLMTSMHVDHAREVPEYEIDPKELDFTNSKEITKGTFCIALWRGIEVAVKKLGEDVIINEEKVKAFRDELALFQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRDFMKRKGALKPSTAVRFALDIARGVGYLHENKPSPIIHRDLEPSNILRDDSGHLKVADFGVSKLLAVKEDKPLTCQDTSCRYVAPEVFNQEEYDTKVDVFSSELSFPTATAPIAARPPPARNAGCGGRDGVADATGAFSGRGSRGFPGRSSSGFKSVVHLFRFGL 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07747 401 Pfam Protein kinase domain 167 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g07747 401 ProSiteProfiles Ankyrin repeat profile. 70 102 IPR002110 GO:0005515
Vivi1g07747 401 FunFam Integrin-linked protein kinase family 18 146 - -
Vivi1g07747 401 FunFam serine/threonine-protein kinase STY46-like 148 231 - -
Vivi1g07747 401 Gene3D - 5 144 IPR036770 -
Vivi1g07747 401 ProSiteProfiles Protein kinase domain profile. 120 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g07747 401 Gene3D Phosphorylase Kinase; domain 1 147 230 - -
Vivi1g07747 401 ProSiteProfiles Ankyrin repeat region circular profile. 70 102 - -
Vivi1g07747 401 SMART ANK_2a 37 66 IPR002110 GO:0005515
Vivi1g07747 401 SMART ANK_2a 103 132 IPR002110 GO:0005515
Vivi1g07747 401 SMART ANK_2a 70 99 IPR002110 GO:0005515
Vivi1g07747 401 MobiDBLite consensus disorder prediction 15 32 - -
Vivi1g07747 401 SUPERFAMILY Protein kinase-like (PK-like) 151 337 IPR011009 -
Vivi1g07747 401 Gene3D Transferase(Phosphotransferase) domain 1 231 338 - -
Vivi1g07747 401 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 146 338 - -
Vivi1g07747 401 MobiDBLite consensus disorder prediction 1 32 - -
Vivi1g07747 401 PIRSF ILK 1 341 - -
Vivi1g07747 401 Pfam Ankyrin repeats (3 copies) 42 132 IPR002110 GO:0005515
Vivi1g07747 401 SUPERFAMILY Ankyrin repeat 41 133 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07747 Vivi-Chr1 209824780 209842382 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07747 2 394 MAP Kinase Kinase Kinase AT4G18950 63.092 7.05e-179 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Vivi1g07747 Pkinase 3e-40 CL0016