Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07696 ATGATTTCAAAAACAAGAACCTCTATCATTAATGTTGTTATTATCATAGTAATTTTATATAAAGCAAATGTTGTATTATCATATGACAATAGTCTAATTCCTGCTGATAGATCCCAAGTAGATTCATGGTTTAATAAGAATGTGGGTCCATTAAAACAAAGAAAAAGTACCCTTGAACGATTAGTGGATGCAGAGCCTGGTGCTAAGGTTATTAAAGTAATGAAAGATGGTAGTGGTCAATTCAAAACCATCACCGATGCCATCAATAGCATACCTACTGGAAACAACAAACGTGTAATTCTTAAGATAGGTCCTGGAAATTATAAGGAGAAAATAACAATTGACAGGTCTAAACCTTTTATTACATTGTTAGGTACACCAAAAAATATGCCTAATTTAACTTTTGATGGTACTGCAAAACAATATGGCACAGTTGATAGTGCAACATTGATTGTTCCTAATATGAGTTCTTTTGTTTCTTGA 483 0.3209 MISKTRTSIINVVIIIVILYKANVVLSYDNSLIPADRSQVDSWFNKNVGPLKQRKSTLERLVDAEPGAKVIKVMKDGSGQFKTITDAINSIPTGNNKRVILKIGPGNYKEKITIDRSKPFITLLGTPKNMPNLTFDGTAKQYGTVDSATLIVPNMSSFVS 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07696 160 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 62 158 - -
Vivi1g07696 160 Pfam Pectinesterase 71 152 IPR000070 GO:0030599|GO:0042545
Vivi1g07696 160 SUPERFAMILY Pectin lyase-like 68 154 IPR011050 -
Vivi1g07696 160 Gene3D - 30 159 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07696 Vivi-Chr1 206873404 206873886 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07696 10 152 Carbohydrate Esterase AT1G69940 52.448 9.06e-48 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07696 K01051 - vvo:131593624 310.457