Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07641 ATGGCACAGAATACTGAGGTTGATGATAATGGAAGAGAGAACAAACCCAACCAAAAAGTTTCATTCTACAAACTCTTCACTTTTGCAGATGCTCTTGATGTGAGTTTGATGATCATTGGCAACATCTCTGCCATTGCTAATGGAATGTCACAGCCTATCATGACTCTTATTCTTGGCAGAATCATCAACGCCTTTGGTAACACTGATCCACACCATACTCTCAAACAAGTTTCTAAGGCTTCATTGTTGTTTGTTTACCTCGCTGTTGGGACCGGAATCGTATCGTTCCTACAGGTATCGTGTTGGATGGTGACAGGAGAAAGACAAGCTGCGAGGATTCGTAGTTTGTACTTGAAAACAATATTGAAACAGGATATTGCGTTTTTCGATACTGAAACAAACACAGGAGAGGTAATTGGTAGAATGTCTGGTGACACAATTCTCATTCAAGATGCAATGGGAGAAAAGGTTGGCAAGTTTACTCAACTTGTTACATCATTTTTTGGTGGCTTTGTGGTTGCTTTCATAAAAGGATGGAGACTAGCTGTAGTTTTGCTTGCATGTGTACCATGTGTTGTCGTTGTTGGCGGAGTCATGTCTATGCTCATGGCGAAAATGTCGACTCGTGGACAAGCGGCTTATACAGAAGCCGGAAATGTTGTTGATCAAACTGTTGGAGCCATCAGAACAGTTGCATCTTTTACTGGGGAGAAAAAAGCGATTGAAAAGTACAATGAAAAATTAAAAGTTGCTTATACGACTACGGTTCAACAAGGAACTGCGACAGGATTTGGAATGGGGTTACTTTCATTGATTGTGTTTAGCACCTATGGACTTGCAATGTGGTATGGTTCCATGTTAGTCCTTGAGAAGGGATATACTGGTGGAACTGTCATGAGTGTAATCATAGCTCTTATGACCGGTGGAATGTCACTGGGTCAGACATCCCCATGCATAGATGCATTTACTGCAGGCCAAGCAGCAGCATATAAAATGTTTGAGACGATTAAAAGAAAGCCCAAAATCGATGCATATGACACAAGTGGTGTTATCTTGGAAGACATAAAAGGAGATATCGAACTCAAAGATGTTTACTTTAGATATCCTGCAAGGCCAGATGTGCAGATATTTGCTGGATTTTCGCTGTTTGTTCCAAGTGGCACAACTACTGCTTTGGTCGGTCAAAGTGGGAGTGGAAAGTCTACTGTAATCAGTTTATTGGAAAGATTCTATGATCCTGATTCTGGAGAAGTACTTATAGATGGTGTGAATTTGAAGAATTTGCAGCTTAAATGGATAAGGGAACAGATTGGGTTGGTTAGTCAAGAGCCGATCTTGTTTACTACTACTATCAGAGAGAATATAGCATATGGGAAAGAAGATGCAACCGATGAGGAGATTACAGCGGCAATAAAACTTGCTAATGCGAAAATGTTCATCGACAAACTGCCTCAGGGCCTTGACACCATGGCGGGACAAAACGGTACTCAACTTTCTGGTGGTCAAAAGCAAAGAATTGCAATTGCTAGAGCAATATTGAAGAACCCGAGAATCCTGCTTCTTGATGAAGCAACGAGTGCGTTGGATGCTGAGTCTGAACGTATTGTTCAAGAAGCTTTAGAAAAAATTATGTTTAAAAGGACTACCGTTGTTGTTGCGCATCGTTTAACAACTATCAGAAATGCTGACAGTATAGCAGTGGTTCATCAGGGAAAAATCGTGGAGAAAGGAGCTCATGATGAGCTAATCAAAGATGTAGAAGGTGCTTATTCTCAGCTTATTCGTTTACAAGAAGGAGAAAAAGAAAGCCAAAATTCTGAAGCAGATAAGTCAAGCCACATGTTAAATAGAGATTTGTCTAGATCTTCCACCCAAAAGAATTCCCTTGTGATGTCAACAAGCCAAAGATTCTCAGGGAGAATCTCCCAAATGAATTCCCTTGTGATGTCAACAAGCCAAAGATCCTCGGGGAGAATCTCCCAAATTGGTGTACAAATAGAAGAACCAGATATCGAAGAAGGTCAAGTTGATAGTAATAAGAAGAAACAGAAAAATGTTTCTATAAGACGTTTGGCCTACTTGAACAAACCTGAGATTCCTGTCTTACTGCTTGGGTCCATTGCTGCAATAGTGAACGGTGTAGTGTTCCCTGTATTTGGCCTAGTCTTCTCATCGGCCATTAGTATGTTTTACAAACCTCCAGAACAACAGAAGAAAGAAGCTAGGCTCTGGTCGCTTCTATACGTTGGTTTGGGTTTGGTTACTCTAGTGGTTTTACCACTTCAGAATTACTTCTTTGGGATTGCAGGTGGGAAACTTGTAGAAAGAATTCGTTCGCTGACATTTGCAAAGGTTGTGCACCAAGAAATAAGTTGGTTTGATGACCCTGCAAATTCAAGTGGTGCAGTTGGTGCAAGACTATCAACCGACGCTTCAACTGTGAAAAGTCTTGTTGGAGACACATTGGCTCTTATTGTGCAAAACATATCAACAATCACAGCTGGTCTAGTTGTAGCATTCACTGCTAATTGGATTCTCGCTTTTATAGTTTTGGCTGTGTCACCAGTGGTTCTTGTGCAAGGAATCATTCAGATGAAGTTTCTTGAAGGATTCAGTGGAGATGCCAAGGTGATGTATGAACAGGCGAGTCAAGTGGCAAACGACGCTGTTAGTAGCATCAGAACTGTTGCATCATTTTGTGCAGAATCAAAGGTTATGGATATGTATCGGAAGAAATGTTCAGGTCCAGAAAAACAAGGTGTTCGTTCAGGGCTTGTAAGTGGTGCAGGATTCGGCTTCTCTTTTGCGGCTCTATATTGCATGACTGCTTTTTGTTTCTACATAGGAGCTATTTTAGTGCAGAATGATAAAGCAACTTTTCCAGAGGTTTTCAAGGTTTTCTTCAGTTTAACTATAACAGCAATTGGCGTTTCTCAGTCTAGTACTTTGGCACCAGACACTAATAAGGCGAAAGATTCCGCCGCTTCGATATTTGAAATTCTTGACAGTAAACCTACTATTGACTCCAGTAGTAACGAAGGCGAAACATCAGAAACAGTTACAGGTGATATTGAACTTCAACATGTCTGCTTCAATTACCCAACAAGGCCTCATATTCAAATTTTCAAAGATTTATGTCTAAGTATCCCTGCCGGAAAGACTGTTGCCTTGGTTGGAGAAAGTGGAAGCGGAAAATCAACAGTTATAAGCCTCTTAGAGCGATTTTATAACCCGGACTCAGGACATGTACTACTCGACGGAGTGGATATAAAAACTTTCAGATTAAGCTGGTTGAGGCAACAGATGGGTTTAGTTGGTCAAGAGCCTATTCTTTTCAACGAAAGCATTCGCGCCAACATAGCTTATGGCAAAGAAGGAACTGCTACAGAAGATGAGATCATTGAAGCAGCTAAAGCAGCCAATGCACACAGCTTCATAAGTTCTCTTCCAACTGGTTACGATACATCGGTTGGCGAAAGAGGCACACAGTTATCAGGTGGACAAAAGCAACGCATTGCTATTGCAAGAGCAATGTTGAAAAACCCGAAAATACTTCTGCTTGATGAAGCGACAAGTGCACTTGACGCGGAGTCAGAGCGTATAGTTCAAGAGGCTTTAGATAAAGTGAGTGTGAACAGAACTACTGTGGTGGTGGCTCACCGTCTTACAACGATTCGAGGAGCTGATACTATAGCAGTAATTAAAAATGGAGTGGTTGCTGAAAAGGGAAGACATGATGTGTTGATGAAGATTACTGATGGTGTTTATGCTTCATTAGTAGCTCTTCATTCAAGTTCATCATAA 3804 0.4109 MAQNTEVDDNGRENKPNQKVSFYKLFTFADALDVSLMIIGNISAIANGMSQPIMTLILGRIINAFGNTDPHHTLKQVSKASLLFVYLAVGTGIVSFLQVSCWMVTGERQAARIRSLYLKTILKQDIAFFDTETNTGEVIGRMSGDTILIQDAMGEKVGKFTQLVTSFFGGFVVAFIKGWRLAVVLLACVPCVVVVGGVMSMLMAKMSTRGQAAYTEAGNVVDQTVGAIRTVASFTGEKKAIEKYNEKLKVAYTTTVQQGTATGFGMGLLSLIVFSTYGLAMWYGSMLVLEKGYTGGTVMSVIIALMTGGMSLGQTSPCIDAFTAGQAAAYKMFETIKRKPKIDAYDTSGVILEDIKGDIELKDVYFRYPARPDVQIFAGFSLFVPSGTTTALVGQSGSGKSTVISLLERFYDPDSGEVLIDGVNLKNLQLKWIREQIGLVSQEPILFTTTIRENIAYGKEDATDEEITAAIKLANAKMFIDKLPQGLDTMAGQNGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERIVQEALEKIMFKRTTVVVAHRLTTIRNADSIAVVHQGKIVEKGAHDELIKDVEGAYSQLIRLQEGEKESQNSEADKSSHMLNRDLSRSSTQKNSLVMSTSQRFSGRISQMNSLVMSTSQRSSGRISQIGVQIEEPDIEEGQVDSNKKKQKNVSIRRLAYLNKPEIPVLLLGSIAAIVNGVVFPVFGLVFSSAISMFYKPPEQQKKEARLWSLLYVGLGLVTLVVLPLQNYFFGIAGGKLVERIRSLTFAKVVHQEISWFDDPANSSGAVGARLSTDASTVKSLVGDTLALIVQNISTITAGLVVAFTANWILAFIVLAVSPVVLVQGIIQMKFLEGFSGDAKVMYEQASQVANDAVSSIRTVASFCAESKVMDMYRKKCSGPEKQGVRSGLVSGAGFGFSFAALYCMTAFCFYIGAILVQNDKATFPEVFKVFFSLTITAIGVSQSSTLAPDTNKAKDSAASIFEILDSKPTIDSSSNEGETSETVTGDIELQHVCFNYPTRPHIQIFKDLCLSIPAGKTVALVGESGSGKSTVISLLERFYNPDSGHVLLDGVDIKTFRLSWLRQQMGLVGQEPILFNESIRANIAYGKEGTATEDEIIEAAKAANAHSFISSLPTGYDTSVGERGTQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAESERIVQEALDKVSVNRTTVVVAHRLTTIRGADTIAVIKNGVVAEKGRHDVLMKITDGVYASLVALHSSSS 1267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07641 1267 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1024 1261 IPR003439 GO:0005524
Vivi1g07641 1267 MobiDBLite consensus disorder prediction 598 630 - -
Vivi1g07641 1267 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 38 324 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi1g07641 1267 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 703 989 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi1g07641 1267 CDD ABC_MTABC3_MDL1_MDL2 359 597 - -
Vivi1g07641 1267 Gene3D ABC transporter type 1, transmembrane domain 83 998 IPR036640 GO:0005524|GO:0016020
Vivi1g07641 1267 CDD ABC_6TM_Pgp_ABCB1_D1_like 37 332 - -
Vivi1g07641 1267 FunFam ABC transporter B family member 1 682 990 - -
Vivi1g07641 1267 Pfam ABC transporter 380 526 IPR003439 GO:0005524
Vivi1g07641 1267 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 349 597 IPR027417 -
Vivi1g07641 1267 FunFam ABC transporter B family member 1 1014 1264 - -
Vivi1g07641 1267 Gene3D - 1014 1266 IPR027417 -
Vivi1g07641 1267 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 359 595 IPR003439 GO:0005524
Vivi1g07641 1267 Pfam ABC transporter 1043 1192 IPR003439 GO:0005524
Vivi1g07641 1267 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1017 1261 IPR027417 -
Vivi1g07641 1267 MobiDBLite consensus disorder prediction 600 616 - -
Vivi1g07641 1267 FunFam ABC transporter B family member 1 349 598 - -
Vivi1g07641 1267 ProSitePatterns ABC transporters family signature. 498 512 IPR017871 GO:0005524|GO:0016887
Vivi1g07641 1267 SUPERFAMILY ABC transporter transmembrane region 684 1008 IPR036640 GO:0005524|GO:0016020
Vivi1g07641 1267 Gene3D - 357 611 IPR027417 -
Vivi1g07641 1267 SMART AAA_5 386 572 IPR003593 GO:0016887
Vivi1g07641 1267 SMART AAA_5 1051 1238 IPR003593 GO:0016887
Vivi1g07641 1267 FunFam ABC transporter B family member 9 24 354 - -
Vivi1g07641 1267 CDD ABC_MTABC3_MDL1_MDL2 1024 1260 - -
Vivi1g07641 1267 Pfam ABC transporter transmembrane region 703 974 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi1g07641 1267 Pfam ABC transporter transmembrane region 37 309 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi1g07641 1267 PANTHER ABC TRANSPORTER B FAMILY 7 598 IPR039421 -
Vivi1g07641 1267 SUPERFAMILY ABC transporter transmembrane region 24 343 IPR036640 GO:0005524|GO:0016020
Vivi1g07641 1267 CDD ABC_6TM_Pgp_ABCB1_D2_like 692 1007 - -
Vivi1g07641 1267 ProSitePatterns ABC transporters family signature. 1164 1178 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07641 Vivi-Chr1 203607900 203612727 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07641 20 1263 Calmodulin-binding Proteins AT2G36910 44.852 0.0 1063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07641 K05658 - gmx:100801771 1922.13