Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07639 ATGGCAAGGTTTAGTTCATGTTACGGGAAGGAACTTTTTTTTGTTCTTCTTTTATTATCGTATTTGTCCTTTCAAGTTGCAACATGTGGCTCCATAGTAAAGTTTCTTCCTGGATTCAATGGTCCCCTTCCTTTTCTGCTTGAAACTGGGTATGTGGGAGTGGGAGAAGAAGAGGATGTGCAAGTGTTTTATTATTTCATTGAATCAGAGAATAATCCAAAGGAAGATCCTCTCATGCTTTGGCTAACTGGTGGACCTGGTTGCTCGGCTTTGTCTGGTCTTGTCTTTGAAATTGGTCCACTTGAATTTAAAAAGGGGGAATATAACGGGAGTTTGCCTAACCTGATACTGAAACCACATTCATGGACAAAGGTAAGTAGCATTATATTCGTAGATTTGCCTGTTTTCACAGGCTTTACATATGCCACAACAAATTCTGGTTCACAACGAAGTGACTCTATATTAGTTCATCAAACTCATCAATTTTTTAGAAAGTGGTTAGTTGATCATCCAAAATTCCAATCAAATGAAATTTACATTGGCGGTGATTCATACTCGGGTATCCCTATTCCAGGAATTGTTCAAGAAATTATACAAGAAAATGAAAAAGGTGTCCAACCTTGGATGAATCTTCAGGGATACTTGTTGGGAAATGCTGTAACAACCAGAAAGGAAAGTAACTATAGAATTCCTTTTGCTCATGGAATGGGACTCATATCCGATGAACTATACGATTCACTCCAAATAAATTGTAAAGGCGATTATGTAAATGTAGAAAGTAGAAATATTTTATGTTCTAAAGATATTGAATTATTTGAAGAGGCTACATCAGGACTTAATTCAGCTCATATTTTAGACCTACAATGTGAGTGGCGTGATGATACTGAAAAAATTCTGAGATCTCTAATCAAGAAATATCCCTCCAACTTCCTCACTTCAAATCTCAGATTGCCTCCCTTAAATTGTCGAAGTTATCCATATTTCCTTTGCGCTGTTTGGGCCAATGATGAGAGTGTTCGCAACGCATTACACATACGTAAGGGTAGTATGGGAAAATGGCATCGTTGTACCTTTAATATACCTCATAAGAAGGATATATTAAACAGTTATGATTATCATGTAAATCTCAGTAGAAAAGGCATCCGTTCACTAATTTACAGTGGAGATCATGACTTGTTAGTTCCTTTCTTGGCGACACAAGCATGGATAAGATCTTTAAATTATTCCATCATTGATGATTGGAGACAGTGGCATACAAATGACCAAGTTGCAGGATACACACGAACTTACTCTAATCTGATGACATTTGCAACCGTTAAGGGTGGAGGACACACAGCTCCAGAGTTTCAGCCTAAAGAATGCCTTGACATGTATAATAGATGGATATCTAATAAGGCTTTGTAG 1404 0.3725 MARFSSCYGKELFFVLLLLSYLSFQVATCGSIVKFLPGFNGPLPFLLETGYVGVGEEEDVQVFYYFIESENNPKEDPLMLWLTGGPGCSALSGLVFEIGPLEFKKGEYNGSLPNLILKPHSWTKVSSIIFVDLPVFTGFTYATTNSGSQRSDSILVHQTHQFFRKWLVDHPKFQSNEIYIGGDSYSGIPIPGIVQEIIQENEKGVQPWMNLQGYLLGNAVTTRKESNYRIPFAHGMGLISDELYDSLQINCKGDYVNVESRNILCSKDIELFEEATSGLNSAHILDLQCEWRDDTEKILRSLIKKYPSNFLTSNLRLPPLNCRSYPYFLCAVWANDESVRNALHIRKGSMGKWHRCTFNIPHKKDILNSYDYHVNLSRKGIRSLIYSGDHDLLVPFLATQAWIRSLNYSIIDDWRQWHTNDQVAGYTRTYSNLMTFATVKGGGHTAPEFQPKECLDMYNRWISNKAL 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07639 467 FunFam Serine carboxypeptidase-like 11 27 467 - -
Vivi1g07639 467 SUPERFAMILY alpha/beta-Hydrolases 33 465 IPR029058 -
Vivi1g07639 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Vivi1g07639 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 434 447 IPR001563 GO:0004185|GO:0006508
Vivi1g07639 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Vivi1g07639 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Vivi1g07639 467 Gene3D alpha/beta hydrolase 29 299 IPR029058 -
Vivi1g07639 467 Gene3D - 323 466 - -
Vivi1g07639 467 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 32 451 IPR001563 GO:0004185|GO:0006508
Vivi1g07639 467 Pfam Serine carboxypeptidase 37 464 IPR001563 GO:0004185|GO:0006508
Vivi1g07639 467 FunFam Carboxypeptidase 321 466 - -
Vivi1g07639 467 FunFam Carboxypeptidase 369 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07639 Vivi-Chr1 203536403 203550718 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07639 27 56 Calmodulin-binding Proteins AT2G22960 73.333 2.23e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07639 K16296 - gmx:100792006 754.592