Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07638 ATGAACAACATAAAAAATATGGCAAAGTTTAGTCAAAGCAATGCTACTCATCATGATTTCCTTATTGGAAAGGTTATTTTTGTTGTTCTTCTATTATCACATATTTCATTTCAAGTTGCAACGTGTGGCTCTACAGTAAAGTTTCTTCCTGGATTCAATGGTCCCCTTCCTTTTCTGCTCGAAACTGGGTATGTGGGAGTGGGAGAAAAAGAGGAAGTGCAAGTGTTTTATTATTTCATCGAATCAGAAAATAATCCCAAAGAAGATCCTCTCATGCTTTGGCTAACGGGTGGACCTGGTTGTTCTGCTTTGTCTGGTCTTGTCTTTGAAATAGCTAATTGCAACTCTGGGCCAATTGGATTTAAAAGAGAGGAATACAATGGGAGCTTGCCAAATCTGATCTTGAGGGAACATTCATGGACAAAGGTGAGTAGCATTATATTTGTAGATTTGCCTGTTTCTACGGGCTTCACTTATGCCACTACAGATTCGGGTTCTCAACGACGTGACTCGATACAAATTGACCAAGCTCACCAATTTTTTAGAAAGTGGTTGATCGATCATCCAAAATTTCAATCAAATGAAGTTTACATCAGCGGCGACTCATATTCGGGTATTACTCTTCCTGTAATTGTTCAAGAAATTATACAAGCAAATGAAAAAGGGATCCCACCATGGATAAATCTTCAGGTATACGTGTTAGGGAATCCTGTAACAAATAAAAAGGAAATAAACTATAGAATCCCTTTTGCTCATGGAACTGGACTCATATCTGATGAACTATACGAGTCACTGCAAAAAAATTGTAATGGAGATTATACAAATTCAGAGACCAAAAGAGTTTTATGTTCCAAAGTACTCCGTTCTTTCGAAAAGGCTATATCAGAAATTAGTATAGCCCTTTTAGAACCGCTATGTACATGGCTAAATACTGAAAATTCTCCAAGGAGATCTCTAATTAATAAATATCACTCCAAAGTGTCGCCCTTAAAATGCCGAAACCTTCCATATAAACTTTCCGCTTATTGGGCCAACGATGATAATGTTCGCAAAGCACTGCACATACGTAAGGGAAGTATTGGGAAATGGCAACGTTGTTCCTTTGATATACCTTATGAGGAAGATATCCCTAGTAGCTTTGATTATCATGTAAATCTAAGTAGAAAAGGATATCGTTCACTAATTTACAGTGGTGATCATGACATGAAGGTTCCATTATTGGATACCAAAGCATGGATAAAATCTTTAAATTATTCCATTGTTGATGATTGGAGATCTTGGTATACAAATGAACAAGTTTCAGGATACACAAGAACTTACTCGAATCAGATGACATTTGCAACTGTGAAGGGCGGAGGACACACTGCACCTGAGTTCCTTCCTGAAGAATGTTTTGCCATGTTTAGTAGGTGGATATCTAAGAGACCTTTGTAG 1434 0.3745 MNNIKNMAKFSQSNATHHDFLIGKVIFVVLLLSHISFQVATCGSTVKFLPGFNGPLPFLLETGYVGVGEKEEVQVFYYFIESENNPKEDPLMLWLTGGPGCSALSGLVFEIANCNSGPIGFKREEYNGSLPNLILREHSWTKVSSIIFVDLPVSTGFTYATTDSGSQRRDSIQIDQAHQFFRKWLIDHPKFQSNEVYISGDSYSGITLPVIVQEIIQANEKGIPPWINLQVYVLGNPVTNKKEINYRIPFAHGTGLISDELYESLQKNCNGDYTNSETKRVLCSKVLRSFEKAISEISIALLEPLCTWLNTENSPRRSLINKYHSKVSPLKCRNLPYKLSAYWANDDNVRKALHIRKGSIGKWQRCSFDIPYEEDIPSSFDYHVNLSRKGYRSLIYSGDHDMKVPLLDTKAWIKSLNYSIVDDWRSWYTNEQVSGYTRTYSNQMTFATVKGGGHTAPEFLPEECFAMFSRWISKRPL 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07638 477 SUPERFAMILY alpha/beta-Hydrolases 46 476 IPR029058 -
Vivi1g07638 477 FunFam Serine carboxypeptidase-like 11 40 477 - -
Vivi1g07638 477 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 45 459 IPR001563 GO:0004185|GO:0006508
Vivi1g07638 477 FunFam Carboxypeptidase 331 476 - -
Vivi1g07638 477 PRINTS Carboxypeptidase C serine protease (S10) family signature 444 457 IPR001563 GO:0004185|GO:0006508
Vivi1g07638 477 PRINTS Carboxypeptidase C serine protease (S10) family signature 184 209 IPR001563 GO:0004185|GO:0006508
Vivi1g07638 477 PRINTS Carboxypeptidase C serine protease (S10) family signature 136 148 IPR001563 GO:0004185|GO:0006508
Vivi1g07638 477 PRINTS Carboxypeptidase C serine protease (S10) family signature 149 159 IPR001563 GO:0004185|GO:0006508
Vivi1g07638 477 Gene3D alpha/beta hydrolase 56 476 IPR029058 -
Vivi1g07638 477 Pfam Serine carboxypeptidase 50 473 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07638 Vivi-Chr1 203458728 203468994 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07638 40 69 Calmodulin-binding Proteins AT2G22960 70.000 8.52e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07638 K16296 - gmx:100794342 674.085