Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07582 ATGGGGTTTTCTTTGGCTTTTGAAGAAACAGAACAAGATACAAGGTTTTTAGGTTCCAATAACAACAACAATTCTATGATCATGGCTTCTTCAAGTGTTGTTAAGAGCATAACAAATTCATCAACAATTCAACTTGATTCAATCTCTCAACAACAACAAAACCATCATCATCATCATCATCATCATCATCTCCATCATCAACAGCAACAACAGCAGCAACAACATCATCAACAGCAGCATCAGCAGCAACAACAGCATCATCGTATGAATGATGATAATCAAATTTCTTTTGGAATGGTGCCATCTTCATCTTCATCCTCTATCGCTAACAACTACTTAAGCAAAGATTCAAGTGCTTTTGATTTAGGTGAATTGGATCAAGCTTTTTTTCTGTATCTGGATGGACAATCACAAACACAAGCTGATCCTTCTACTCTTGAAGATCAAAGACAAAATTCATCATCATCAGGAATGAGGCCACCACCAACTCTTAACATTTTCCCATCTCAACCAATGCATGTATCACCACCACCACCATCAAATTCAAAGGCTAGCATGGGATTAACTTCTCCACAAACAAGTGGTTCCAAAAAACCATCTCAACCGTCCATGGAGTTGGCAAACCAACGAAATGAAACCCTTTATGCAACTGCACCACCAAAACCTGTCAAGAGAGAGAATAATCGCAAGGGTACAACTTCAAGTTCTGAACATGAAGGACCAAAAACACCAGATCCTAAGACTCTGAGAAGACTTGCTCAGAATAGAGAGGCAGCAAGGAAAAGCAGGCTTAGGAAAAAGGCTTATGTTCAGCAGCTAGAATCAAGCAGGATTAAGCTTAATCAGCTTGAACAAGAATTGCAGCGTGCTAGAGCTCAAGGCGTTTTAATGGGCGGAGGTGCAATTTTGGGAGGAGATCAAGGCATACCAATTTCTATGAACAACATTAGCTCAGAGGCTGCAATGTTTGATGTGGAATATGGGAGATGGCTAGAGGAGCACCTAAGGCTTGTATGTGAGCTAAGAGCAGCAGTAGATGAACAATTGCATGAAAATGAGCTTAGGTTATATGTGGAAAATTGTTTGGCTCACTATGATCAAGTAATTAATCTCAAAAACATTCTAGCTAGAACAGATGTTTTTCATCTTGTTTTCGGAATGTGGAAAACACCGGCCGAGCGTTGCTTCATGTGGATCGGCGGATTCAGACCATCTGAACTCATTAAGATAATTGCAAGTCAAATTGAGCCTCTTACGGAGCATCAAATACTTGGAATATGTGGGTTGCAACAATCAACACAAGAAGCAGAAGAAGCACTTTCCCAAGGGCTTGATGCACTCAACCAATCTCTTTCAGAGACCATAACCTCAGATTCTTTGAGCCATCCACCTAACATGGCTAACTACATGGGACAAATGGCTCTTGCCATGAACAAGCTTTCAACTCTTGAAAGTTTTGTGAGACAGGCAGATAATCTGAGGCACCAAACAATTCATCGTCTGCATCAGCTGTTAACAATTCGTCAAGCTGCAAGGTGTTTGGTTGCAATGTCAGAGTATTTTCATCGCCTTCGAGCGTTGAGTACTCTCTGGTTGACTCGCCCTCGCCAAGAATAG 1617 0.41 MGFSLAFEETEQDTRFLGSNNNNNSMIMASSSVVKSITNSSTIQLDSISQQQQNHHHHHHHHHLHHQQQQQQQQHHQQQHQQQQQHHRMNDDNQISFGMVPSSSSSSIANNYLSKDSSAFDLGELDQAFFLYLDGQSQTQADPSTLEDQRQNSSSSGMRPPPTLNIFPSQPMHVSPPPPSNSKASMGLTSPQTSGSKKPSQPSMELANQRNETLYATAPPKPVKRENNRKGTTSSSEHEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLNQLEQELQRARAQGVLMGGGAILGGDQGIPISMNNISSEAAMFDVEYGRWLEEHLRLVCELRAAVDEQLHENELRLYVENCLAHYDQVINLKNILARTDVFHLVFGMWKTPAERCFMWIGGFRPSELIKIIASQIEPLTEHQILGICGLQQSTQEAEEALSQGLDALNQSLSETITSDSLSHPPNMANYMGQMALAMNKLSTLESFVRQADNLRHQTIHRLHQLLTIRQAARCLVAMSEYFHRLRALSTLWLTRPRQE 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07582 538 Gene3D - 246 295 - -
Vivi1g07582 538 MobiDBLite consensus disorder prediction 223 250 - -
Vivi1g07582 538 PANTHER TRANSCRIPTION FACTOR TGA9 144 537 - -
Vivi1g07582 538 MobiDBLite consensus disorder prediction 139 163 - -
Vivi1g07582 538 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 250 265 IPR004827 GO:0003700|GO:0006355
Vivi1g07582 538 FunFam BZIP family transcription factor 246 295 - -
Vivi1g07582 538 Coils Coil 266 293 - -
Vivi1g07582 538 MobiDBLite consensus disorder prediction 139 250 - -
Vivi1g07582 538 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 245 289 IPR004827 GO:0003700|GO:0006355
Vivi1g07582 538 MobiDBLite consensus disorder prediction 164 178 - -
Vivi1g07582 538 SUPERFAMILY Leucine zipper domain 247 289 IPR046347 GO:0003700|GO:0006355
Vivi1g07582 538 SMART brlzneu 243 296 IPR004827 GO:0003700|GO:0006355
Vivi1g07582 538 MobiDBLite consensus disorder prediction 70 108 - -
Vivi1g07582 538 CDD bZIP_HBP1b-like 247 299 - -
Vivi1g07582 538 MobiDBLite consensus disorder prediction 179 215 - -
Vivi1g07582 538 MobiDBLite consensus disorder prediction 54 69 - -
Vivi1g07582 538 Pfam Seed dormancy control 338 413 IPR025422 GO:0006351|GO:0043565
Vivi1g07582 538 MobiDBLite consensus disorder prediction 46 108 - -
Vivi1g07582 538 Pfam bZIP transcription factor 247 285 IPR004827 GO:0003700|GO:0006355
Vivi1g07582 538 ProSiteProfiles DOG1 domain profile. 320 534 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07582 Vivi-Chr1 200821351 200827887 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07582 110 538 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 62.864 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi1g07582 DOG1 1.6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07582 K14431 - gmx:100799713 700.279