Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07540 ATGAACCGATGTCCGGTTGTCAACTTCCACCGTTTTCTTCTCAAGTTGATGCTGAAAAAGAAAAAAGTACCGTCGTTAAAAAAATCTCGAGAGAAATTTACAAGGGATGAGGATACACTTCTTATCCAATCATGGCTCAATGTTTCAAAGGATCCAGTAGTGAGAGTTGATCAAAAGGCTGAGAGTTTTTGGGTAAGTGTTGCTGCCAATTATAACCAGTATTGTAGACAATCGCGGGAAAAGTTAGGGGGACAATTAAAATGTCGATGGCATCGAATAAATGGCTTGGTTCAAAAATTTGTTGGGTGTTACAAACAAGCTGTTAATGGAAAGAAAAGTGGGACATCGGAGAACGATATCATGGCCGCTGCATATGGTTTTTTTGCTCAGGATCAAGGTACAACATTCAATCTTGAGTACGCATGGCGACTGTTAAAAGATGAACCTAAATGGATGGGAGAATCGATTGGAAGTTCTTCAAAAATAACAAAGACTTCTGCTAGTGGGGCATCATCGGATAACCCAGATACACCTTCAAGTTATGAGTTTAACTCTTCATCACCAATGGAGCGTCCAATGGGACAAAAAGCAGCAAAAAGGAAGGGTAAGGCAAATGAAATTCCAACTGCTAAGCAAGATGCAAGGAATAAAAGATCAACGACAATGGAAAGACTAGCACAAAGTAAGGAGGACGAGATAGAAGTAAAGGTCTATCAAATCCTGATGAAAGATACTTCTACTATGAGCGATGGTCAACGAGATATTCATGAAAAGTATTGTAATAAGATGAAAAAAAATGGAATGTAG 807 0.3891 MNRCPVVNFHRFLLKLMLKKKKVPSLKKSREKFTRDEDTLLIQSWLNVSKDPVVRVDQKAESFWVSVAANYNQYCRQSREKLGGQLKCRWHRINGLVQKFVGCYKQAVNGKKSGTSENDIMAAAYGFFAQDQGTTFNLEYAWRLLKDEPKWMGESIGSSSKITKTSASGASSDNPDTPSSYEFNSSSPMERPMGQKAAKRKGKANEIPTAKQDARNKRSTTMERLAQSKEDEIEVKVYQILMKDTSTMSDGQRDIHEKYCNKMKKNGM 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07540 268 MobiDBLite consensus disorder prediction 156 191 - -
Vivi1g07540 268 PANTHER - 26 265 - -
Vivi1g07540 268 Pfam No apical meristem-associated C-terminal domain 135 253 IPR029466 -
Vivi1g07540 268 Coils Coil 211 231 - -
Vivi1g07540 268 MobiDBLite consensus disorder prediction 156 228 - -
Vivi1g07540 268 MobiDBLite consensus disorder prediction 194 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07540 Vivi-Chr1 197072574 197073380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07540 27 232 Glutathione S-transferase Gene Family AT5G41240 33.188 1.20e-28 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07540 - K19269 vvo:131635631 374.4