Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07510 ATGTACACAAATCAATGGGAATTATATGAACATGAAAGCTTTGAGCCTTTCAGCATACTAACTCCTCTAGAAGACATAACAACAACCATTCATGAATCAAATGTAAATGAAACATATATGAGCTTTCAACCTCAACAACACTATCAGCAACAGATTGACATTCCTATTTGGAGCAATGAATTTTCCATGAAAACAACAACTGAATCACCTTTTCAGTTTTGCCAAGAGAACTACTCAAACATTATCGCCAAACAAGATCAACAAACTACCTCTTTAGATTTCGTTGCTGAATCTTTAATGTCTATCAGTGAAGATAGTATTTCTTATTCCGAAAAGTGTAGTCAATTTGCCTCTTGTTCTGATAACACGCCAATTTGTGAGAACTTTCCACAACAACATAAGAAGGTGCTGGAGGGTTTTTCTACTTTACATCCGAAGTCCCATGAAATGACTCAGCTGGAATCATGTATAAACCAAAACAAGCAGCAATCTTCATCTTGTGGAGTTGATTTTGCAACAGCTACTAACTCTGTTTCTAAGATAACTGCAAAGGGTAAAAGAAGATTAATATGGACAAAAGAAATGCATGAACCATTTGTTATAATAGTCAGCCAGCTTGGTGGTCCAGAAAAGGCAAAGCCTAAGGCTATACTTCAGATGATGGGTTTGGATGAGTTGAATATTTCGCATGTTAAAAGTCATTTGCAGAGTTAA 714 0.3585 MYTNQWELYEHESFEPFSILTPLEDITTTIHESNVNETYMSFQPQQHYQQQIDIPIWSNEFSMKTTTESPFQFCQENYSNIIAKQDQQTTSLDFVAESLMSISEDSISYSEKCSQFASCSDNTPICENFPQQHKKVLEGFSTLHPKSHEMTQLESCINQNKQQSSSCGVDFATATNSVSKITAKGKRRLIWTKEMHEPFVIIVSQLGGPEKAKPKAILQMMGLDELNISHVKSHLQS 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07510 237 NCBIfam myb-like DNA-binding domain, SHAQKYF class 186 236 IPR006447 GO:0003677
Vivi1g07510 237 Gene3D - 185 237 - -
Vivi1g07510 237 SUPERFAMILY Homeodomain-like 184 236 IPR009057 -
Vivi1g07510 237 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 163 236 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07510 Vivi-Chr1 194596341 194597571 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07510 157 236 G2-like Transcription Factor Family AT5G29000 47.500 3.47e-15 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vivi1g07510 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07510 - - psat:127115590 356.681