Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07472 ATGGACTTGATAAAACTTGTCTCTCTCGTTTTCTTTCTCTATGCATTCATTCATATCATAGCTTTTGTCCTAATTATCAAAAACACAAAATCTCCAAGGCTCCCACCAGGTCCTCCTAGTTATCCATTCATAGGAAACATATTGCAACTTGGTCCTTCCAAACTCCACCAATCACTCACTAAACTCTCCAAAACATATGGACCAATTATGATGGTTAAAATTGGAACTATCACCACTGTGGTCATTTCCTCTCCAAAAATAGCCAAAGAAGCACTTCATACAAATGACCAAGCTTTATCTCACAGATTTGTACCTCAATCTGTCCAAGCACTTTCACATCACAAAGCTTCTCTTATATTCATGCCTGTCTCACCAAAATGGAAGACCCTTAGAAAACTTTGTGCCACCAAGATATTCTCTTCTCAAACTCTTAATTCCACTCAACCTCTCCGTTTACAAAAATTGAAAGAACTCGGTTTTTACTTGCAAGAAAATTGTAGAAAGGGTAAAGCTATTGATATTGGTGAGGCTGCATTTTCTACGTCTCTTAACTCACTATCCAACACTCTTTTCTCCATTGACTTGGCTAGTTTTACTTCTGCTTCTTCTCAAAAGTTTCGAGATGTAATTTCCTCTATGTTGATTGATGTTTCAAAGCCTAATATTGCAGACTATTATCCTATTTTTCGTAGAATTGATCCGGAGGGCCTGCAACGAAAGATGAAAAAGTATTACGAGAAGTTGCTTACACTTTTTGAGTCTATCTTTGAAGAAAGAAGTACTCAAAAGAAAGATTATGGAATAGAACAAACTGATGTATTAGATTTATTGCTCGATATCACCCGAAAGGAAGATCCTGAATTGACACTGCATGATGTGTTACATCTATTTCTGGACTTATTTGTGGCTGGAACAGACACAACATCGGTAACAGTTGAATGGGCGATGGCAGAGTTGCTAAAAAATCCAGAAAAATTGAAGAAAACAAGAAATGAACTTCAACGAGTTATCAATAAAGACAAATTTGAATCTAAAGAGTTCGATATTAATAAGCTTCCTTACCTACAAGCAGTAGTAAAAGAAACCCTTAGGATGCATCCAGCAGCCCCTATATTAATTCACAAATCAATATCAGATGTCGACTTATGCGGGTTTAGGGTACCAAAAGATGCACAAGTTCTTGTGAATGTGTGGTGCATGGGAAGAGACTCAAGTACTTGGGCTAATCCAGATTTGTTTCAACCCGAAAGGTTTTTGGAAAGTGGAGAGGTTTTTAGAGGAGAAGATTTTGGGTTCATTCCCTTTGGTGGTGGTAGAAGAATGTGTCCTGGTGTTTCATTTGCTCATAGGATTGTGCATACCATGCTGGCCACTTTCCTTTACCAATTTGATTGGAAGATAGCTGATGAGGTAAATTTTGAAGACATGGATATGGCTGAAAAATTTGGGATTACTTTGCACAAAGTCAAGCCTCTCATGGCTATTCCCATCAAAGAATGA 1500 0.376 MDLIKLVSLVFFLYAFIHIIAFVLIIKNTKSPRLPPGPPSYPFIGNILQLGPSKLHQSLTKLSKTYGPIMMVKIGTITTVVISSPKIAKEALHTNDQALSHRFVPQSVQALSHHKASLIFMPVSPKWKTLRKLCATKIFSSQTLNSTQPLRLQKLKELGFYLQENCRKGKAIDIGEAAFSTSLNSLSNTLFSIDLASFTSASSQKFRDVISSMLIDVSKPNIADYYPIFRRIDPEGLQRKMKKYYEKLLTLFESIFEERSTQKKDYGIEQTDVLDLLLDITRKEDPELTLHDVLHLFLDLFVAGTDTTSVTVEWAMAELLKNPEKLKKTRNELQRVINKDKFESKEFDINKLPYLQAVVKETLRMHPAAPILIHKSISDVDLCGFRVPKDAQVLVNVWCMGRDSSTWANPDLFQPERFLESGEVFRGEDFGFIPFGGGRRMCPGVSFAHRIVHTMLATFLYQFDWKIADEVNFEDMDMAEKFGITLHKVKPLMAIPIKE 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07472 499 CDD CYP76-like 63 496 - -
Vivi1g07472 499 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g07472 499 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g07472 499 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g07472 499 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g07472 499 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g07472 499 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g07472 499 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g07472 499 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 10 498 - -
Vivi1g07472 499 SUPERFAMILY Cytochrome P450 35 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g07472 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Vivi1g07472 499 Pfam Cytochrome P450 35 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g07472 499 Gene3D Cytochrome P450 24 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g07472 499 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g07472 499 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g07472 499 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g07472 499 FunFam Cytochrome P450 76C4 26 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07472 Vivi-Chr1 192251916 192253740 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07472 1 499 Cytochrome P450 AT2G45550 44.531 7.46e-153 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07472 - - lja:Lj0g3v0020129.1 621.313