Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07448 ATGGAAAATGTGGTAAAGCATACACAGAAGGTTGTGATGATAGATCCTGTTACTAAATGTGAAATCGTTACATACGAAAAAGTTTGGAATTATACTATTATAGATATTAGTTTGTTGGGGTTTGGAACTACTTTTCCTCAGATTTCATTAGCTACTATTGATGTTATACAGAATCTAGGAAACTTAAATGCTGGAGGTTTGGGACCTGGAACACTCGTTGGTTCTGCTAATAAAAAATGCAAAAGAGGAAGAAGTAACAAAGTTATATTTGCGTGCGATAAAGGTGGAAAATATAAGGATAAAAGTGAGACTCAAAGTGCTACTAAGAGATGTGGATGTCCATTCAAAATCAGATCGACTCCGGCAAAAGATGGGTCTGGATGGAAGGTTGATGTAAAATGTGGAGTTCATAATCATGGTTTACCAGATAGATTAGAAGGCCATTCATTTGTTGGTAGGTTGACAACAGATGAGAAGCAGCATGTTGCTGATTTGACAAAGAGACATGTTCCGCCTAGACACATATTGACTTCCTTGCAAGAGCGAGATCCTGAGAACGTCACTCGGATCACGCAAATATACAAGCATAAAAGTGTGATTGAAGCGGAGATAAGAGGTCCAGGAAGTGAGATACAACATTTGCTTAAGCTTATAGAGGAGGCGAACTATGTTTATTGGAGTAGGAAACGGGATGATTGTGAAGTTGTGAGAGATATTTTTTGGGCTCATCCAGATTCGGTAAAGTTGCTGAATCTTTTTCCTACTGTCTTGATTATGGACGCCACTTATAAGACCAACAAATATAGACAACCTCTGTTTGAAATAGTTGGTATGACATCGACCGAGTTGACATTTGCGGTTGCATTTGCTTATATGGAGTGTGAGCAGACAGAGAGTTATATTTGGGTCTTGGATAAGCTGAAGCAATTGTTTGTGAAGAAAGATGTGGTTCCACAAGTGATTTTGACGGATAGAGATCTTGCTTTGATGAAAGCAGTTGAAGTTGTTTTTCCTACGACGCATAACTTGCTATGTCGCTTTCATATTAACCAAAATGTTGGGATGAAATGCAAGGAATATGTGATGAAAGACATGCGAGAGACGATAGGCACATTGTGGAAAGATGTTGTATGGGCTAGTAATGAGGTTGAGTATGGTGTACGGTTGCAATATCTTGAACAAGCATGCTTTGCTTGTACTAACTTCCTCGATTACGTGAAGAACACTTGGTTGATCCCACATAGGCAAAGATTTGTAGGCGCATGGATTAATCTAGTGCTTCATTTTGGTAACACCACGACAAATCGGGTTGAATCTGCACATTGGAAGCTAAAGCAGATGTTAGGAAACAGCCTTGGTGACATGGTCAAAGTTTGGGAAGCTATGAATTCTAACCTAAAAATCCAAATAGTATCGAGAGCTGCTTTGAGACGCATTGCAGAAGAGTTATCGAGGCTTGATTATGTGTTAAATAGTAGGGAAACATGTGGTTGTACTATGAGAACAAGTTATGGGCTACCTTGTGCTTGTGAGATGGGAAGATCGATTGTTGTTGGAATCCCATTACAAATAGAAAGTGTTCATCTTCAATGGAGGATACTATCTATGGAAGGTGACTTGCCTTTAGATGAGGAAGCTGGTTCGGAGGATGATATGAGTAATGCAATTGATGAATTATGGAGAAGGTTTAAATCACTAGATGTTGTTGGAAAAAGAGCATTAAAAAGTAGGGTTTGTGAAATTGCATATCCCACAACAACTTCATTGTGTCCACCACCTGAGAAAATAAAAACTAAAGGCGGAGTGAAGAGGAAAGGGAAGAAACCAGTTGGGTATGATGTTTATAGGGATCCTTCAGGTTTTGAGTATGCTGATCAGGCGTCTCAATGTTCACAAAAACAATCGCAAGCATCACAAACTTCCAGGAAGCAATCACAATCAAAGAAGCAATCACAAGCAAAGGATGAGGATTTCACTCTTCAGTTTCCTTGTCATATTAGGCCATATATTACCGAGATTGTTAATGTTGTAGCAGATGGTAATTGTGGATTTAGAGCAATTGCTTCGTGGCATGGGTATAGTGAGGATGGTTGGGCAATGGTTCGTCGTGACTTGGACATGGAATTAAGAGAAAAGAAGGACTTATATGAGAGATTGTTCGGTCTAAGTTTATCCGAAGTGAGAAATGGATTGTTGATAGATCATGTTGGTTTTCAACCACCGGAGAAATGGTTGACACTACCAGAGATGGGTTATTTGATAGCGAATCGGTATAACATTATTCTTGTGCTGCTTGGTAACCCTTGCTTGACCTTTTTTCCTATGACAACAACATTTTCTCCAAGTGCTCCTACATATTGCATTGGCCTTGTCAACAGGAATCATTATCTTCGGGTTAATATGAAAGAAGGCTTCCCGCTGCCACCCGTCACGGTAGATTGGATGAAGTTTCGTCATCAAGTGGCGACATCTTGGATGTTAGGATTTGCTGGACGTCTTCAACATTGGCATCATCTTACGCCTATGTTACCATCACGTGGTAGTGATGGCTGTTTGAGATTGGTTAATGAAACAGTGATCGGGTTTTTGTTTGAGAATTAG 2601 0.3968 MENVVKHTQKVVMIDPVTKCEIVTYEKVWNYTIIDISLLGFGTTFPQISLATIDVIQNLGNLNAGGLGPGTLVGSANKKCKRGRSNKVIFACDKGGKYKDKSETQSATKRCGCPFKIRSTPAKDGSGWKVDVKCGVHNHGLPDRLEGHSFVGRLTTDEKQHVADLTKRHVPPRHILTSLQERDPENVTRITQIYKHKSVIEAEIRGPGSEIQHLLKLIEEANYVYWSRKRDDCEVVRDIFWAHPDSVKLLNLFPTVLIMDATYKTNKYRQPLFEIVGMTSTELTFAVAFAYMECEQTESYIWVLDKLKQLFVKKDVVPQVILTDRDLALMKAVEVVFPTTHNLLCRFHINQNVGMKCKEYVMKDMRETIGTLWKDVVWASNEVEYGVRLQYLEQACFACTNFLDYVKNTWLIPHRQRFVGAWINLVLHFGNTTTNRVESAHWKLKQMLGNSLGDMVKVWEAMNSNLKIQIVSRAALRRIAEELSRLDYVLNSRETCGCTMRTSYGLPCACEMGRSIVVGIPLQIESVHLQWRILSMEGDLPLDEEAGSEDDMSNAIDELWRRFKSLDVVGKRALKSRVCEIAYPTTTSLCPPPEKIKTKGGVKRKGKKPVGYDVYRDPSGFEYADQASQCSQKQSQASQTSRKQSQSKKQSQAKDEDFTLQFPCHIRPYITEIVNVVADGNCGFRAIASWHGYSEDGWAMVRRDLDMELREKKDLYERLFGLSLSEVRNGLLIDHVGFQPPEKWLTLPEMGYLIANRYNIILVLLGNPCLTFFPMTTTFSPSAPTYCIGLVNRNHYLRVNMKEGFPLPPVTVDWMKFRHQVATSWMLGFAGRLQHWHHLTPMLPSRGSDGCLRLVNETVIGFLFEN 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07448 866 CDD OTU 672 796 - -
Vivi1g07448 866 MobiDBLite consensus disorder prediction 626 647 - -
Vivi1g07448 866 MobiDBLite consensus disorder prediction 626 654 - -
Vivi1g07448 866 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 64 444 IPR031052 GO:0006355
Vivi1g07448 866 Pfam MULE transposase domain 256 352 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07448 Vivi-Chr1 190427337 190433494 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07448 1 76 Antiporters AT2G47600 76.316 1.14e-30 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07448 - - vvo:131661614 1710.27