Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07392 ATGACAATTGCTCATTCACTTGTTACTCATGTTACGTTTGATCGGTTTAATGGGTTTCTTGGGCTTCCAGTGGAGTTTGAAGTTGAGATCCCGAGTCGTGTTCCCAGTGCTAGTGTAAGTGTGTTTGGAGTCTCAGCTGAATCAATGCAGTGTTCTTATGATTCAAAAGGAAACAGTGTCCCTACTATTCTTATGTTAATGCAGGACCATTTATATTCACAGGGAGGATTGAAGGCTGAAGGTATATTTTGCATAAACCCAGAAAATAGTAAAGAGGAGCATGTGAAAAACCAATTGAATAGTGGTATCGTGCCTGATGACATTGATGTCCACTGCTTGGCGGGACTAATCAAAGCGTGGTTCCGAGAGCTTCCTTCCGGAGTGCTAGACGGTCTTTCCCCTGAACAAGTTCTTCAATGCAACACAGAAGAAGAATCTTTTGAGCTTGTGAAACAGCTTAAACCAACCGAGCCTGCCTTACTCAGTTGGGCTATTGATCTCATGGCTGATGTCGTCCAAGAAGAGGAACATAACAAAATGAATGCAAGAAACATTGCAATGGTTTTTGCTCCAAACATGACTCAGGTTAACCGATGGTTGTCAAGTTGTGGTTATAAGCTTTGGTATGAGATTCGAATATTCTTTGGAGGACCTGACGATAATGAAGCGCTTGCTTACGGTATGAGAATAGCCAAACATCCTGACATTGTGCTAACTGTTATTAAAGTTGTGTCTCCACCCGGAACAACATTATCATTCAGCGCTAAGTTAGTCGGTGTTGCATCGGTAGAATATACTATGTTAGGAAGAATGTAA 816 0.4167 MTIAHSLVTHVTFDRFNGFLGLPVEFEVEIPSRVPSASVSVFGVSAESMQCSYDSKGNSVPTILMLMQDHLYSQGGLKAEGIFCINPENSKEEHVKNQLNSGIVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLQCNTEEESFELVKQLKPTEPALLSWAIDLMADVVQEEEHNKMNARNIAMVFAPNMTQVNRWLSSCGYKLWYEIRIFFGGPDDNEALAYGMRIAKHPDIVLTVIKVVSPPGTTLSFSAKLVGVASVEYTMLGRM 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07392 271 SMART RhoGAP_3 58 246 IPR000198 GO:0007165
Vivi1g07392 271 Gene3D Rho GTPase activation protein 29 203 IPR008936 -
Vivi1g07392 271 ProSiteProfiles Rho GTPase-activating proteins domain profile. 44 238 IPR000198 GO:0007165
Vivi1g07392 271 PANTHER MKIAA1688 PROTEIN 8 196 IPR044785 GO:0005096
Vivi1g07392 271 Pfam RhoGAP domain 61 195 IPR000198 GO:0007165
Vivi1g07392 271 SUPERFAMILY GTPase activation domain, GAP 40 197 IPR008936 -
Vivi1g07392 271 CDD RhoGAP 61 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07392 Vivi-Chr1 186976758 186980508 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07392 213 247 Antiporter Super Family AT5G41610 68.571 4.15e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07392 - - tpra:123918915 360.918