Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07376 ATGGACAAAAAAATCATTGATAGAGAAACACATGACTTAATGAATGTTGACTCATTCTCTCAACTTCCCTTCATCCGCCCTCCACCTAAAGAAAAAGGCATCCGCCTCTTCGGCATCGAGTTCGGCGGCCGAGCAGCCGCCGATGACATCGACGACTCCTCCGAGTCTCTCGAAACAACATTCGAGGTTGAAAACAACAACACCAACAAAGACACCAACACTAACACCAACAACAACAGCAGCAACAGCATCAGCAACAACAACAGCAGTAATAACTACATGGAAAACAACAGAAGATTTGAATGTCATTACTGTTGTAGAAACTTTCCAACTTCACAGGCTTTAGGAGGTCACCAAAACGCACACAAAAGAGAACGGCAACATGCAAAACGACAACACCTTCAATCAACCATGGTACATGCTACATCTTTCTCTGATCCACATCTCTACCATCATCATCATCAACAGCAACAACATCCTCTCTACAGATTCACATCATCATCACCATCCTCATTATCATCATCACCTTCTTATCCAACATGGAACTCAAACTCAGCCACTGCAAGATTCTATAACCATCCAACTTCTTCATACTCTCAACAACCTATCAATGGTAGTCCTTTAGCTTTCTGGAGAATCCCAAACGGCACCATCCAGAGTAACCCTAGTTTCAACCATGAACGTCCTCTCCCTTTACTTGCTTCCGAGGAAAGAGCGAATCCGTCTCAGGACGGATACGCACACGGAGTTCGTTCTAATGTTTCGCATAATCGCTACGTTTATGATACTAAACGTAGCGACCATGTTAGTTTAGATCTTCATCTCTAA 828 0.4336 MDKKIIDRETHDLMNVDSFSQLPFIRPPPKEKGIRLFGIEFGGRAAADDIDDSSESLETTFEVENNNTNKDTNTNTNNNSSNSISNNNSSNNYMENNRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRQHLQSTMVHATSFSDPHLYHHHHQQQQHPLYRFTSSSPSSLSSSPSYPTWNSNSATARFYNHPTSSYSQQPINGSPLAFWRIPNGTIQSNPSFNHERPLPLLASEERANPSQDGYAHGVRSNVSHNRYVYDTKRSDHVSLDLHL 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07376 275 ProSitePatterns Zinc finger C2H2 type domain signature. 102 122 IPR013087 -
Vivi1g07376 275 SUPERFAMILY beta-beta-alpha zinc fingers 96 128 IPR036236 -
Vivi1g07376 275 MobiDBLite consensus disorder prediction 149 179 - -
Vivi1g07376 275 MobiDBLite consensus disorder prediction 159 179 - -
Vivi1g07376 275 MobiDBLite consensus disorder prediction 65 92 - -
Vivi1g07376 275 ProSiteProfiles Zinc finger C2H2 type domain profile. 100 127 IPR013087 -
Vivi1g07376 275 MobiDBLite consensus disorder prediction 115 136 - -
Vivi1g07376 275 PANTHER ZINC FINGER PROTEIN GIS 1 275 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07376 Vivi-Chr1 186178720 186179963 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07376 1 275 C2H2 Transcription Factor Family AT3G58070 36.585 2.98e-43 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07376 - - gmx:100806594 240.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g07376 1 186178720 186179963 Vivi1g07376 1 186178720 186179963 ECH