Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07358 ATGGACTTCGACGAAGACCTCGGATGCTGCGCCTGCTGCGGATGTCTATGCTGTTGCCTCTTCAATGGCATCTGTAACCTAATATGCACTCTCATCGTAATCCTAGGAGTCTTTGTTTTCCTCTTCTGGCTCATCGTTCACCCTATTCCTCTCAAATTCAGCGTAACAGATGCATCCCTTACTCAATTCAGTTTCACAAACAACAACACCCTTAACTATAATCTCACTCTCAACATCACAATCCGAAACCCTAACAGAATGCTTGGTATCTACTACGATAACATTGAAACGGACGCGTTTTTTCAAGGTGTTAGGTTTAGTTCTCAAACCCTAGGAGCATTCTTTCAGCATCGTAAGTATACAAGCTTCTTGAAGCCTGTTTTTAATGGCCGGCAATTGGTTCCTTTGAGGTCTGATCAGATTTCAGAATTCAAGAAGGAGAGGAAAGACGGAGTTTATAGAATTGATGTGAAGGTTTTGCTTGATGTGAGGTTTAAATTGGGTTTGTTTAAGATAGGGAATGTGGAACCTAGGGTTCGTTGTGATTTGAAGGTTCCTATGAAAACAGGTAATAGAACTTTGTTGATGAATGGGTTTCAAGCTACTGATTGTGATTGGGATTACAAATGGAGGTGA 636 0.4119 MDFDEDLGCCACCGCLCCCLFNGICNLICTLIVILGVFVFLFWLIVHPIPLKFSVTDASLTQFSFTNNNTLNYNLTLNITIRNPNRMLGIYYDNIETDAFFQGVRFSSQTLGAFFQHRKYTSFLKPVFNGRQLVPLRSDQISEFKKERKDGVYRIDVKVLLDVRFKLGLFKIGNVEPRVRCDLKVPMKTGNRTLLMNGFQATDCDWDYKWR 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07358 211 Pfam Late embryogenesis abundant protein 78 174 IPR004864 -
Vivi1g07358 211 PANTHER OS05G0367900 PROTEIN 20 188 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07358 Vivi-Chr1 185465588 185466223 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07358 45 191 SNARE and Associated Proteins AT1G32270 36.054 4.54e-27 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07358 - - vvo:131661066 389.808