Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07357 ATGGACGTAGAAGATGAAAATTATTGTTGTTGCTGCAATAACACCGTAACCGTAATTTGCAATCTAATCATCATATTATTAGGACTCATCGTTCTCCTCTTCTGGCTTATCATACAACCTAAGGCTGCCAAATTCACAGTTACTAATGCATCCCTTACTCAATTCAGTTTCACAAACAACAACACACTTAACTACAATCTCGTCCTCGACATCACGATCCGAAACCCTAACCGAAAACTCGGTATCTACTACGATAACATCGAAACGCTTGCGTTTTATAAAGATGCTAGGTTTGGTTTCCAAACCCTAGGACCATTCTTTCAGCATCATAAGAGTACAGATTTTTTGGGTCCGGTTTTTATAGGTCAACAAGTGATTTCTTTGAGTCGAGATCGGATTTCGATGTTCGAGAAAGAGAAGAGAGATGGAGTTTATGGAATTGATGTGAAGATTTTGATGAATGTGAGGTTTAAGTTGGGTTTGTTTAAGACAGGGAAAGCAAAACCTAAGGTTCGTTGTAATTTGAAGGTTCCTTTGAGATCGAGCAATGTAACAACTTTGTTGGGGAATGAATTTCAAGCCACTGATTGTGACTGGGATTATAAAGGGATATTGTTTCGTTAG 624 0.383 MDVEDENYCCCCNNTVTVICNLIIILLGLIVLLFWLIIQPKAAKFTVTNASLTQFSFTNNNTLNYNLVLDITIRNPNRKLGIYYDNIETLAFYKDARFGFQTLGPFFQHHKSTDFLGPVFIGQQVISLSRDRISMFEKEKRDGVYGIDVKILMNVRFKLGLFKTGKAKPKVRCNLKVPLRSSNVTTLLGNEFQATDCDWDYKGILFR 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07357 207 PANTHER OS05G0367900 PROTEIN 9 182 IPR044839 GO:0098542
Vivi1g07357 207 Pfam Late embryogenesis abundant protein 71 173 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07357 Vivi-Chr1 185452924 185453547 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07357 37 185 SNARE and Associated Proteins AT1G32270 37.748 2.02e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07357 - - vvo:131661066 237.654