Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07354 ATGGGCAACAACTGTGTCGGACCAAACCTTGGTGGCAATGGCTTCCTTCAATCCGTTTCGGCGGCCGTTTGGAAAACGCGTCCTCCGGAGCCGAGGCTTCCTCCACCTAACACCGAGGAGAAGGAAAAAGCTCCACCGCCGGCAAATGCTGCGAAGGATTCCTCTAAAACAGAGTCGAGTTCCTCCGGAAAAGGTTTGGAACATGTTGATAATCCTCCAATGCCGGTTCAGAACACACCGCCTGAACCGGTGAAAATTGCTGCACAAGAACCAAAACCGCTTCCAGTTGAACATGAGAAGCCGGTTAGACTAGATGTAAATAATGCGACCCCGGCAGCTAGTACTGCTGGGGGTGGTGGTGAGGGTGATGCAGGGAAAGCTAAGAAACCTACACATGTGAAAAGGGTATCAAGTGTTGGACTTCAGGTAGAGTCTGTATTGGGTAGGAAAACAGAAAACATAAAGGATTTTTATAGTTTGGGGAGAAAACTAGGGCAAGGACAATTCGGGACGACGTTTCTATGTATGGAGAAAGGGACTAACAAGGAGTTTGCATGCAAATCGATTGCGAAGAGGAAATTAACAACACAAGAGGATGTTGAGGATGTTAGGAGGGAGATTCAGATAATGCATCACTTAGCAGGTCACCCGAATGTGATACAAATAGTTGGTGCTTATGAAGATGCTGTTGCTGTTCATGTTGTTATGGAGTTATGTGCTGGTGGTGAACTTTTTGATAGGATTATACAGAGAGGACATTATACTGAGAGAAAAGCAGCTGAACTTGCCAGGTTGATTTTAGCTGTTGTTCAGGCTTGTCATGCTTTAGGTGTCATGCATAGGGATTTGAAGCCGGAGAATTTTCTATTTGTTAACCATGAAGAGGAATCGCCGCTTAAGACAATAGATTTTGGACTTTCTGTGTTTTTTAGACCAGGTGAATTATTTACTGATGTGGTTGGAAGCCCATACTATGTGGCCCCTGAAGTTTTGCGGAAGAACTATGGTCAAGAATGTGATGTTTGGAGCGCGGGGGTGATCATTTATATTTTACTCAGTGGCGTTCCCCCATTTTGGGATGAAACGGAACAAGGAATATTTGAGCAAGTATTGAAAGGCGAGCTTGATTTTCAATCTGAACCATGGCCCAGCATATCTGCCAGTGCAAAGGATCTTGTTCGAAGAATGCTTGCAAGGGACCCTAAGAAGCGGTTGACGGCACATGAAGTTCTTTGCCATCCTTGGGTTCAGGTTGGAGGTGTTGCTCCTGATAAACCACTTGATTCCGCTGTTTTATCTCGCTTGAAGCAGTTCTCTGCTATGAACAAGCTCAAGAAAATAGCCATTCGAGTAATTGCTGAAAATCTGTCTGAGGAGGAAATTGCAGGACTGAAAGAAATGTTCAAGATGATAGACACAGATAATAGTGGACAGATCACTCTCGAGGAACTGAAAAATGGTTTAGAGAGAGTGGGATCCGTTCTGAAGGATTCTGAAATTACCTGGTTAATGCAAGCGGCAGACATTGATAATAGTGGTACCATAGACTATGGTGAATTCATAGCAGCTATGCTTCATCTAAACAAGGTCCAGAAGGAGGATCATCTATTTGCAGCCTTTAACTACTTTGACAAAGATGGTAGTGGATACATTACGAAGGATGAACTTCAACAAGCCTGTCAACAGTTTGGCCTACAAGAAGACCATCTAGATGATATAATACGTGAAGCTGATAAGGATAATGATGGGCGCATTGACTATAGTGAATTTGTTGCAATGATGCAAGACACTGATTTTGGCAAAAAGGGGATACATACATCATGA 1824 0.4375 MGNNCVGPNLGGNGFLQSVSAAVWKTRPPEPRLPPPNTEEKEKAPPPANAAKDSSKTESSSSGKGLEHVDNPPMPVQNTPPEPVKIAAQEPKPLPVEHEKPVRLDVNNATPAASTAGGGGEGDAGKAKKPTHVKRVSSVGLQVESVLGRKTENIKDFYSLGRKLGQGQFGTTFLCMEKGTNKEFACKSIAKRKLTTQEDVEDVRREIQIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAAELARLILAVVQACHALGVMHRDLKPENFLFVNHEEESPLKTIDFGLSVFFRPGELFTDVVGSPYYVAPEVLRKNYGQECDVWSAGVIIYILLSGVPPFWDETEQGIFEQVLKGELDFQSEPWPSISASAKDLVRRMLARDPKKRLTAHEVLCHPWVQVGGVAPDKPLDSAVLSRLKQFSAMNKLKKIAIRVIAENLSEEEIAGLKEMFKMIDTDNSGQITLEELKNGLERVGSVLKDSEITWLMQAADIDNSGTIDYGEFIAAMLHLNKVQKEDHLFAAFNYFDKDGSGYITKDELQQACQQFGLQEDHLDDIIREADKDNDGRIDYSEFVAMMQDTDFGKKGIHTS 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07354 607 ProSiteProfiles EF-hand calcium-binding domain profile. 567 600 IPR002048 GO:0005509
Vivi1g07354 607 ProSitePatterns EF-hand calcium-binding domain. 508 520 IPR018247 -
Vivi1g07354 607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
Vivi1g07354 607 CDD STKc_CAMK 157 415 - -
Vivi1g07354 607 ProSitePatterns EF-hand calcium-binding domain. 472 484 IPR018247 -
Vivi1g07354 607 FunFam Calcium-dependent protein kinase 1 424 598 - -
Vivi1g07354 607 ProSiteProfiles EF-hand calcium-binding domain profile. 495 530 IPR002048 GO:0005509
Vivi1g07354 607 ProSitePatterns EF-hand calcium-binding domain. 578 590 IPR018247 -
Vivi1g07354 607 FunFam Calcium-dependent protein kinase SK5 244 428 - -
Vivi1g07354 607 SMART serkin_6 158 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g07354 607 Gene3D Transferase(Phosphotransferase) domain 1 244 421 - -
Vivi1g07354 607 MobiDBLite consensus disorder prediction 102 136 - -
Vivi1g07354 607 Gene3D Phosphorylase Kinase; domain 1 160 243 - -
Vivi1g07354 607 SMART efh_1 463 491 IPR002048 GO:0005509
Vivi1g07354 607 SMART efh_1 569 597 IPR002048 GO:0005509
Vivi1g07354 607 SMART efh_1 535 563 IPR002048 GO:0005509
Vivi1g07354 607 SMART efh_1 499 527 IPR002048 GO:0005509
Vivi1g07354 607 FunFam Calcium-dependent protein kinase 1 160 243 - -
Vivi1g07354 607 PANTHER SERINE/THREONINE-PROTEIN KINASE 150 590 - -
Vivi1g07354 607 Pfam EF-hand domain pair 534 595 IPR002048 GO:0005509
Vivi1g07354 607 Pfam EF-hand domain pair 464 524 IPR002048 GO:0005509
Vivi1g07354 607 MobiDBLite consensus disorder prediction 21 86 - -
Vivi1g07354 607 ProSiteProfiles EF-hand calcium-binding domain profile. 531 566 IPR002048 GO:0005509
Vivi1g07354 607 ProSiteProfiles Protein kinase domain profile. 158 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g07354 607 SUPERFAMILY Protein kinase-like (PK-like) 156 417 IPR011009 -
Vivi1g07354 607 ProSitePatterns Protein kinases ATP-binding region signature. 164 191 IPR017441 GO:0005524
Vivi1g07354 607 ProSiteProfiles EF-hand calcium-binding domain profile. 459 494 IPR002048 GO:0005509
Vivi1g07354 607 SUPERFAMILY EF-hand 455 595 IPR011992 -
Vivi1g07354 607 Gene3D - 423 599 - -
Vivi1g07354 607 ProSitePatterns EF-hand calcium-binding domain. 544 556 IPR018247 -
Vivi1g07354 607 MobiDBLite consensus disorder prediction 52 66 - -
Vivi1g07354 607 Pfam Protein kinase domain 158 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07354 Vivi-Chr1 185303662 185309538 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07354 1 607 EF-hand Containing Proteins AT2G38910 73.641 0.0 901
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Vivi1g07354 Pkinase 2.8e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07354 K13412 - gmx:100813232 991.104