Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07341 ATGAGTGATGATAGAGTTGATTTAGCATCGGCATCAAAAAGTTTAGATGTTATAGAGAACATGTCAGAAGAGTGGATTCCTATATGTGAAGATGAATCCAAACCTATAATCGGTAAGATATTTGATTCTTTAGAAGAAGGAGAGAAATTTTATAAAATGTATGCACATTCTGTTGGATTTAGTGTGCGTAATTCATCTCAAACAAAGGATAAAAATGGGCTGAAATGGAAGTACTTTTTATGCTCAAAAGAAGGTTTTAAAGTAGAAAAACCGGTAACCTTGCATGGATTGGTTATTAGTGAAGATAGTTTGCCTAAAGTGAGAAAAAGAAAATTGACAAGGGAAGGATGCAATGCAAAAATTGCTTTTAGGAGGACAATAGATGGTAGATATGAAGTTGCAAAATTTTATGAAGGTCATACACATGCATTAGTCACACCTAGAAAGAAACAGCTCCTAAGATCAGCAAGGAGTCTTAACAATGCTCACAAGAAACTATTATTTTCTTGTAACAAAGCTAATGTGGGAACTTCCAAAGTTTATCAATTATTGAAAGAGCAAGTTGGGGGTTATGAAAATATAGGATGTACACAAAGAGATTTTCAAAACTATTCAAGAGATTTGAAAGAACTGATCAAAGACTCGGATGCACACATGTTCATTGATAATTTTAGAAGAAAACACGAGATGAACCATTCATTTTTCTATGACTATGCGGTTGATGATGAAGGTAGGCTGAAATATGTATTTTGGGCTGATAGTATTTGTCGAAAAAATTACTCTTTATTTGGAGATGTGATTTCATTTGACACAACATACAGTACAAACAAGTATAGAACATCGGTGTTACTTGACGAACCATGA 864 0.3345 MSDDRVDLASASKSLDVIENMSEEWIPICEDESKPIIGKIFDSLEEGEKFYKMYAHSVGFSVRNSSQTKDKNGLKWKYFLCSKEGFKVEKPVTLHGLVISEDSLPKVRKRKLTREGCNAKIAFRRTIDGRYEVAKFYEGHTHALVTPRKKQLLRSARSLNNAHKKLLFSCNKANVGTSKVYQLLKEQVGGYENIGCTQRDFQNYSRDLKELIKDSDAHMFIDNFRRKHEMNHSFFYDYAVDDEGRLKYVFWADSICRKNYSLFGDVISFDTTYSTNKYRTSVLLDEP 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07341 287 PANTHER OS01G0519700 PROTEIN 31 274 - -
Vivi1g07341 287 Pfam FAR1 DNA-binding domain 49 145 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07341 Vivi-Chr1 185008217 185009080 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi1g07341 FAR1 5.3e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07341 - - vvo:131661002 587.8