Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07340 ATGGCACAACCGCAACCCCACAACCGTTGTAGAAGATGCTGTTGCTGCTTCTTCAGCGTAATTTTGAAGCTCGTCATAGCAATAGCTTTCATCCTTTTTCTCATATTCATCATCTTATTCTGCATCGTCCAACCACGATCCTTCAAATTCAGTGTCAAAGAAGCCAAACTCTCCCAATTCAACTACACCACCAACACCCTCCACTACAACCTCGTACTCAACTTCACGGCACATAACCCAAACAAAAAGCTCAACATCTATTACGATGCAATTGAAGGACATGTATCCTACCAAGGAACAAGGTTTGCATCAACGGATGTACCATGTTCGTTCCGTCAATACCCGAAAAGCTCGAGCCCTATGAGTGGTGTTTTGTCAGGACAACGTGTGATGGTTTTTGACCATGACCAGGTTTCTGATTTTGAACGTGATAAGAATGATGGAGTTTTTCGTATTGATGTGAAATTATACTTTACGATGAGGTTTAGGCTTGGTGATTATATTTTTCCATATACTAAAGGCAACATTAAATGTGGTGTTGATGTTCCTTTTGCTTCTAATGGGATTAAGGTCATGAATGCATTTGAACCCACCACATGTGAAGTTAACTTTTAA 615 0.4049 MAQPQPHNRCRRCCCCFFSVILKLVIAIAFILFLIFIILFCIVQPRSFKFSVKEAKLSQFNYTTNTLHYNLVLNFTAHNPNKKLNIYYDAIEGHVSYQGTRFASTDVPCSFRQYPKSSSPMSGVLSGQRVMVFDHDQVSDFERDKNDGVFRIDVKLYFTMRFRLGDYIFPYTKGNIKCGVDVPFASNGIKVMNAFEPTTCEVNF 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07340 204 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 5 190 - -
Vivi1g07340 204 Pfam Late embryogenesis abundant protein 75 165 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07340 Vivi-Chr1 184993403 184994300 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07340 42 185 SNARE and Associated Proteins AT1G32270 28.966 3.40e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07340 - - vvo:131641987 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05648 6 162728892 162729716 Vivi1g07340 1 184993403 184994300 PCT