Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07338 ATGGTAGAACTAGAAGCAAAAAACCACAACCGTAGCAAAAGACGCAGTTGCTACCTCTTAGCAATAATCATCGTCGTTGCCCTCATAATCCTCATTTTATTCCTCATCATCAAACCACAAACCTTCAAATTCAGTGTCCATAAAGCTAAACTCTCCCAATTCAACTACACGACCAAAACCAACACCCTCCACTACAACCTCGTACTCAATTTCACCGCACGTAACCCAAACAAAAACCTCAACATCTACTATGATGACATAAATGGACATGTATCATACAAAGGAACAAGGTTTGCTTCAACGGATGTTATAACAAGGTTAAATTCATTCCGTCAATACACGAACAGCACGAACCTTATGAGCGGTGTTTTCTCTGGACAACGTCGTGTTGTTTTTGATCGTGATCAGGTTTCTGGTTTTGAACATGATAAGAAAGATGGAGTTTTTCTTATTGAAGTGAAATTATATTTCAAAATAAGGTTTGTGCTTGATGGTTTTAATGTTGGACATAATAAGGGTAACATTAAATGTGGACTTTATGTTCCTTTCGGTTCTAATGGGACTAAGGTTATAAATGCATTTAAACCCACTAAGTGTGATGTTAATTTCTGA 612 0.3709 MVELEAKNHNRSKRRSCYLLAIIIVVALIILILFLIIKPQTFKFSVHKAKLSQFNYTTKTNTLHYNLVLNFTARNPNKNLNIYYDDINGHVSYKGTRFASTDVITRLNSFRQYTNSTNLMSGVFSGQRRVVFDRDQVSGFEHDKKDGVFLIEVKLYFKIRFVLDGFNVGHNKGNIKCGLYVPFGSNGTKVINAFKPTKCDVNF 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07338 203 PANTHER OS05G0367900 PROTEIN 14 183 IPR044839 GO:0098542
Vivi1g07338 203 Pfam Late embryogenesis abundant protein 71 172 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07338 Vivi-Chr1 184783088 184783702 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07338 36 188 SNARE and Associated Proteins AT1G32270 28.846 3.41e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07338 - - vvo:131641987 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05650 6 162760577 162761543 Vivi1g07338 1 184783088 184783702 PCT