Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07309 ATGTCTAGCTCCAAGAAAAAAGTAACCTTAAACTCTGTATCCATAAACCTCGGTTGTGGAACATGTAGAAGACCAAAACTCAGTTTCATATTCAACCCAAAACAAAAACACAAAAAACACCACATTCATAACAACTCTTCATCATCATCTTCTTCTACAAATTCAAACCCTTGGAGACAACGAGACAGACACAATACCGAAACTTCAAGCAGCACTAGCAACGCTACTACACCAACAACAAAAACATCACTCGACTCAAATAAATCACCATCACTGAAAGGCTTCGGAAGAGTCGGAAACGAAGGAGTAGCGGTTGAGAAAGACTCAGATGATCCTTATCTTGATTTCCGACATTCGATGTTACAAATGATATTGGAGAATGAGATATGTTGTAAGGATGATCTTAGAGAGCTTTTGAATTGGTTTCTTGAGCTGAATTCGGTGGAACATCATGGGATTATTATAAGGGCTTTTACTGAGATTTGGAATGGAGTTTTCTCTGTTAAGTCTGGTGTTTCTCCAGGATTCAATCTCAACCGTATGTCACGTGGATAA 555 0.3856 MSSSKKKVTLNSVSINLGCGTCRRPKLSFIFNPKQKHKKHHIHNNSSSSSSSTNSNPWRQRDRHNTETSSSTSNATTPTTKTSLDSNKSPSLKGFGRVGNEGVAVEKDSDDPYLDFRHSMLQMILENEICCKDDLRELLNWFLELNSVEHHGIIIRAFTEIWNGVFSVKSGVSPGFNLNRMSRG 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07309 184 MobiDBLite consensus disorder prediction 34 100 - -
Vivi1g07309 184 Pfam Transcriptional repressor, ovate 109 165 IPR006458 -
Vivi1g07309 184 ProSiteProfiles OVATE domain profile. 105 164 IPR006458 -
Vivi1g07309 184 MobiDBLite consensus disorder prediction 45 59 - -
Vivi1g07309 184 NCBIfam uncharacterized plant-specific domain TIGR01568 103 163 IPR006458 -
Vivi1g07309 184 MobiDBLite consensus disorder prediction 67 90 - -
Vivi1g07309 184 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 34 167 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07309 Vivi-Chr1 183182377 183183250 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vivi1g07309 Ovate 1.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07309 - - tpra:123903281 240.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g07309 1 183182377 183183250 Vivi1g07309 1 183182377 183183250 ECH