Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07308 ATGGTGAAGAAAATGAAACTTCTCTCATTTTTCAAAACCAAAGGTAAAAAATCATCTTCACCAAGGGCTTGTCTACAATGTAGCTACAAACCAAAAACCCTATCTTTCAGAGAAGATAATCCAGAAACTTCAGAATCCATAACACCAGAATTTTCTTCTGAGGATTTCAGAAGTAATTCAGTTGAAACTGTGAATATTGATGATTTACGTTCTGATCGATTTTTCTTCGAATCAGACGAAACTAGATCAATACTTAAGACCAAAGAAAACATTACTAGGTCTAGTAGTAATAATAATAATGAAAGTTTATTATTACCCTTTGAGAACACGGTTGAGTTAGCGGTGGATTCGCAAAACCCTACCGAAGATTTCAAAGAATCTATTGTGGAGATGGTGGAGGCTCATGGTGTTGACAATTGGGAAGGTTTGGAGAAGCTTTTGAGTTGGTATTTGGAAGTTAATGAGGAAAGAAATCATGAGTTTATTATCGATGCTTTTTATGATTTATTTGTTAGTAATCTTGATTCTCCAGATTCTTCTCCTTTGTCGATTGATAGTTTTACTTCTCTTGATTCTTCATGGAGCACAGCTCGTGTTTCATCTTATAGTTCACCTTTGTAA 621 0.3446 MVKKMKLLSFFKTKGKKSSSPRACLQCSYKPKTLSFREDNPETSESITPEFSSEDFRSNSVETVNIDDLRSDRFFFESDETRSILKTKENITRSSSNNNNESLLLPFENTVELAVDSQNPTEDFKESIVEMVEAHGVDNWEGLEKLLSWYLEVNEERNHEFIIDAFYDLFVSNLDSPDSSPLSIDSFTSLDSSWSTARVSSYSSPL 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07308 206 ProSiteProfiles OVATE domain profile. 113 172 IPR006458 -
Vivi1g07308 206 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 11 171 IPR038933 GO:0045892
Vivi1g07308 206 NCBIfam uncharacterized plant-specific domain TIGR01568 113 172 IPR006458 -
Vivi1g07308 206 Pfam Transcriptional repressor, ovate 117 172 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07308 Vivi-Chr1 183099994 183100614 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vivi1g07308 Ovate 1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07308 - - vvo:131635930 372.089