Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07284 ATGGAGGGACTAAAAGATGTGTCAACGGAAGTGGTTGATGAAACAGGTGAGACTACTGTTGATGATATTAGTGCTGAGGATGGAGAAACCATTGAAAATATTATAAATATTGATAGTATGGAGGATATTCTTAGTATGGACTTGAAAAGACTAAGTCCCCACGAGACAAGAAAAATTCAATTTTCAAGTTTGGACATGGCTTATGCGTTCTACAACCAGTATGCTAAAATGAACGGGTTTGCAGTTCGCAAGAGTAAGATCCTTCGAAGCAAGAAAGGAGAAACATTACAGCGGACATTTGTTTGTCACAGGCAGGGGTTTAGGGAGGATAGAGGTTTAACAATAGAAAATCGCAAGCGTGAGCGTAAACCTGATACTCGGTGTGGATGTGAAGCAAAATTTCGAGTGCATATAGACATGTTCTCACAATGTTGGTGGATAACAGTTTTTAACGATCGGCACAACCATGATCTTTTACATGAAGAGTACCATGGAATGCTAGCTTCACATAGAAAAATGGAAGATTCAGATATAATGCAGATGAACGACATGTTGAAGGTTGGTATAAGACCGTCTCAATTCTATGGTTCGTGTGCCAACCAATCAGGAGGGTATGAAAAAATAGGGTTTCGTAGGAAAGATATATATAATCAGATAGGAAAGCAACGCCTTTTGCAACGATGTGATGGTAAAAATGCTTTGCACTATCTTCATGGACTGGCATCTGATGACCCGATGATGTTTTATCGCCACACTGTTGATGGAGAAGGTAGGCTTGAACACCTTTTTTGGTGCGATGGTATAAGCCAAATGAATTTCAAAGTTTTTGGCGATGTGTTGGCATTTGATGCAACATATGGGACGAACAAATACCATTGCCCTTTAGTGGTGTTTTCCGGAGTTAATAACCATAATCATAATATTATATTTGGTGGTGCCATTGTTGCAAATGAAAAAGAAGAAACGTATGTGTGGGTTCTTGAACAATTTTTGGAAGCAATGTCAGGTAAGTCGCCTATATCTGTCATTACTGATGGTGATCTTGCAATGAAGAAAGCTATAAAAAGGGTGTTTCCGAATGCTTATCATAGGTTGTGTGCTTGGCATCTAATTCGCAATGCAATGTCTAACATTGGAGTTCCTGAATTTGTTGGTCAGTTTAGGAAATGCATGTTGGGTGACTATGACTTGGGTGAGTTTCGGCGCAAGTGGGCTGACATGATTGACACATTTGGGTTGCATGACAACAAGTGGGTTACTGAACTGTATGCAAAGAGAAATATGTGGGCTACAGCGCATATACGTGGCAAATTTTTTGCCGGGTTCAGAACTACCTCCCGGTGTGAGGGGTTACATTCAGAAATGGGAAAGTTTCTTCACTCACGATATAATTTGACTAATTTTTTATTACATTTTCATCGGTGCCTTAATTACATGCGTTATAAGGAGGTTGAAGATGATCTTGCATCAAATTACGGAGATCGTGTGCTACAAACGAGATTCCAAAGCTTGGAGCGTTGCGCTGGCAAGTTATTTACTAAGGAAATATTCTTTATGTTTCGTGATATTCTTGCAAAGTCTGCAGAGATGGTTGTGGCAACATGCAATCAAACTTATACATGCTTTATATACACAGTTCGCAAGTACCAAGCGTCAAAAAGGGAGTGGAACGTATCATTCTATCCTGATGATGACGTGTTTAAATGTTCTTGCAAGAAGATGGAATCATTTGGCCTCCCGTGTGAGCATATTATTGCACTATTGATATTTTTAGATGTCGCAGAATTACCAAAGTCTCTGGTGGCAGATCGGTGGACAAAGAACGCGAAGGAAGAGATATGTAGAACAAATAAGCATCTTCCAAAATATTGGGATTCACACAAGTCGTCGAGATATTCTGCTCTTATGTTTCGATATATGCGTTTGAGCAAATTAGTAAGTGAGAATGGTGATGATTTCGATGATCATATGAAACAGGCTGCTGCTGATATCCAAAAAATGGAAGCAAAAAGGGGCTTACATGATGATGGACCCACAAATTCAAGTGAACTTGTCCAGGAGACACTGAAGGATCCTGCTCTAGCTAGAACTAAAGGATGCGCTGGCGATTCTTCATCACGTCAGAAAAAAAGGAAGCGGACTCAGTGTTCTATTTGCGGAAAATTTGGCCATAACAAGCAAACATGTTCATTTCCTCGACATAATGCTAACACGAAAAATTCGTCACTCGGAGATTTTCACAACATTGAATTCAGTGATGACTCTTTGCATAACGATCTTGATTGA 2286 0.3968 MEGLKDVSTEVVDETGETTVDDISAEDGETIENIINIDSMEDILSMDLKRLSPHETRKIQFSSLDMAYAFYNQYAKMNGFAVRKSKILRSKKGETLQRTFVCHRQGFREDRGLTIENRKRERKPDTRCGCEAKFRVHIDMFSQCWWITVFNDRHNHDLLHEEYHGMLASHRKMEDSDIMQMNDMLKVGIRPSQFYGSCANQSGGYEKIGFRRKDIYNQIGKQRLLQRCDGKNALHYLHGLASDDPMMFYRHTVDGEGRLEHLFWCDGISQMNFKVFGDVLAFDATYGTNKYHCPLVVFSGVNNHNHNIIFGGAIVANEKEETYVWVLEQFLEAMSGKSPISVITDGDLAMKKAIKRVFPNAYHRLCAWHLIRNAMSNIGVPEFVGQFRKCMLGDYDLGEFRRKWADMIDTFGLHDNKWVTELYAKRNMWATAHIRGKFFAGFRTTSRCEGLHSEMGKFLHSRYNLTNFLLHFHRCLNYMRYKEVEDDLASNYGDRVLQTRFQSLERCAGKLFTKEIFFMFRDILAKSAEMVVATCNQTYTCFIYTVRKYQASKREWNVSFYPDDDVFKCSCKKMESFGLPCEHIIALLIFLDVAELPKSLVADRWTKNAKEEICRTNKHLPKYWDSHKSSRYSALMFRYMRLSKLVSENGDDFDDHMKQAAADIQKMEAKRGLHDDGPTNSSELVQETLKDPALARTKGCAGDSSSRQKKRKRTQCSICGKFGHNKQTCSFPRHNANTKNSSLGDFHNIEFSDDSLHNDLD 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07284 761 SMART 26again6 567 594 IPR006564 GO:0008270
Vivi1g07284 761 Pfam MULE transposase domain 279 373 IPR018289 -
Vivi1g07284 761 Pfam SWIM zinc finger 569 589 IPR007527 GO:0008270
Vivi1g07284 761 PANTHER OS01G0519700 PROTEIN 59 757 - -
Vivi1g07284 761 ProSiteProfiles Zinc finger SWIM-type profile. 556 592 IPR007527 GO:0008270
Vivi1g07284 761 Pfam FAR1 DNA-binding domain 70 159 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07284 Vivi-Chr1 181257279 181261372 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi1g07284 MULE 3.4e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07284 - - tpra:123913749 1243.8