Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07276 ATGGCCTCTCAGCAGATAACAGAAGAAGCTGTTTGCCTTTGCACTGGAAATCCATTGCCCAAAGACATTGAGCAAATATCTTACTGGCTTCTAAATGAACAATATTCAGAGAGCTTTAAAAGAACTAATGATATGAAAACAAGGAAAGGACTGGCCCTTGTTGATATTGTAAGAGAAGTGACAATGTTTGTATTTAAGATTAAGATACCTCCAGCTGTTCGAGTGCAATTGGTGAATGATTTGGCTGACATAGAGTATGTGTTGCTGCTGCCTACTTTTTTATGCAGTCTTGGAAATTTATTTTTCCACTGA 312 0.375 MASQQITEEAVCLCTGNPLPKDIEQISYWLLNEQYSESFKRTNDMKTRKGLALVDIVREVTMFVFKIKIPPAVRVQLVNDLADIEYVLLLPTFLCSLGNLFFH 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07276 103 FunFam Replication factor C subunit 5 18 92 - -
Vivi1g07276 103 Gene3D - 18 91 - -
Vivi1g07276 103 Pfam Replication factor C C-terminal domain 18 88 IPR013748 -
Vivi1g07276 103 SUPERFAMILY post-AAA+ oligomerization domain-like 18 88 IPR008921 GO:0003677|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07276 Vivi-Chr1 181168593 181169102 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07276 3 96 Core DNA Replication Machinery Family AT1G77470 68.085 4.37e-41 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07276 K10756 - vvo:131660549 209.149