Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07232 ATGGTAAGAAGTGTTATTATACTTGAAAGCTGTCTTTGCGATGCGTATACACCAGCAGGTGAGCCTATCCCTACAAATAAGAGACACAAAGCTGCTGAAATCTTCAGTAACCCAAAGGTTGATGGCGAAATTCCATGGTACGTCACACAAAACATGTCCAACTGTTGGTTGTATGCAATTTCAGTGTACGAGGAAACTGCTGGGTTGATGGTTAATGACCCGGTGTTACGTACACACAAGCCATTGTCTGTGGAGTTGGGACCTGGAATATTGGGAAATATTTTTGATGGAATTCAGAGGCCTTTGAAAACCATTGCAAGAATATCTGCTGATGTCTATATTCCCCGTGGTGTTTCTGTTCCCGCTCTTGACAAAGATACACTTTGGGAATTTCAGCCTAAGAAAATTGGTACATATTGTTCCATTTTATGGTGA 435 0.4138 MVRSVIILESCLCDAYTPAGEPIPTNKRHKAAEIFSNPKVDGEIPWYVTQNMSNCWLYAISVYEETAGLMVNDPVLRTHKPLSVELGPGILGNIFDGIQRPLKTIARISADVYIPRGVSVPALDKDTLWEFQPKKIGTYCSILW 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07232 144 Gene3D - 83 138 IPR027417 -
Vivi1g07232 144 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 59 137 IPR022878 GO:0046034|GO:0046961
Vivi1g07232 144 Pfam ATPsynthase alpha/beta subunit N-term extension 95 134 IPR031686 -
Vivi1g07232 144 Gene3D - 57 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07232 Vivi-Chr1 178868045 178868801 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07232 60 136 Primary Pumps ATPases(2) AT1G78900 92.208 1.19e-43 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07232 K02145 - vvo:131660242 301.982