Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07195 ATGGGTTCGTTTTCGGGGACTTGCGAAATTGTTGAAGCGAGGGAAGAGCTGAATACAGTGAAAGATTCAGGGATATATCAGTCAAGTTCTGGATATAGTAAGGCTGAGAAAAATCAGAAGCTTCCTGCACTGAAAATGGGATACAAGTATAATCTAGATGATGATATTAACAAGCTGTTTGAATCAATTACTCTCAAATCATCGTCAAGAGATTTGAGCTATCTACCAGATGGAACAAGTCCTAGGATGAAAAGTGCGTTAAAAAAGCCCATGATTGTGGGTATACCTCGATCTCCACGAGTTGGGACTTCTGAGCCGGTGACTTTGAAGCAGGCTTTGAGAGACCTATGTATATCTAAGGCATCGGAAATGGCTGCTACTAAAAGGTTATCAAAGTCAGGAGCTTCTCCGAGAATATCGGAGGTCGGGAAGATACAGACATTGTACAATTCGGTCGTTGCTGATGATGCTAGGAGATCCGGGCCTTCTAATGTTGACAGTAAACGGAGTTCAAATGAAATATCTCTGGTGCTAGAAGAAAGCAAGTCACTTGCCTTGAATAAAGAATCTCGGTCTCATCGAACTTCCGAAAGCACATCGTTGAGCCAAAATGCTCATTCTTCCAAAATTGCAGTTGCAACTACACAAAATGGTAATGGGGCTTCATTGATGCAAAGTGATTTGGAATGTTCATCAAGTAAAGTTGAGGATTCACTCCAATCATCAGAACCTTCTCAAATTGAAAATCAAACATCTGCTTCTTCTATATCTTGTTGCAACACCAATGGAAGTAAAGTAGAGTTGCGTGAAAAAGATTCCTCCCCTAAGAAATTGGGAAATAAAGCATCTAAGAATGTGCGGAAAGGTATGTTACAAACTGCATCTTCCTCGTCTTCTTCAGTAAATGGAAGTAGAGTTTGTAAACTTTCGCGTAGCCCCCGAACAGTGAAATTGGCCATAAAAAACAAGGATTCGGGTAAAAAGAAACTAAAACAGGGTTCTGATTCTGCTTTATCTGCTCCTCCATGCAATGAAACAAATAATAAGCCAGTTCCTGCGAGTACAACTCCGCTTGTTTGCGAAAGATGTTGGTGTGAAATAGAAAATACAAATATAGAAAACAGCAAAGGTATTGTAACATCGGGATCTCTCAGCCCTGCAGATGGAATAAACTTGAAGAGTGTGCTTTATGGACCAGCTTCAACTGGTTGTAATAGCAGCAGAGAAGTTGCAAAAGTGAAAAAGAATGGAAGATTGAAAGAGCAGCTTGAATTTTCTCAGAGTTCAAAGAGCAGCCAAGGTGACTACAGTAGTAGTACAAGTACCAGCGACGAGAGTAATATTAGTGGTTCTAGTTGTGGCAATAGACCTCACATGTCGAAGGATTTTAGGTGGCAGGCCATACGGGATGCTCAAGTTCAGCACAGAGTTTTGGGCTTGAGACACTTCAATCTTTTGAAGAAACTTGGTTGTGGAGACATTGGTACTGTATATCTTTCAGAACTAATTGGCCAAAATTGTTTGTTTGCTATAAAAGTAATGGACAATGAGTTTTTGGCACGAAGGAAGAAGATGCCTAGGGCTCAAACTGAAAGGGAAATATTGCGAATGTTGGATCATCCTTTTCTTCCAACACTTTATGCGCAGTTTACATCAGAAAATTTGTCCTGTCTGGTCATGGAGTATTGTCCTGGAGGAGATCTTCATGTTCTACGTCAGAAACAACTTGGTAGATGTTTTTCAGAGCCAGCAGCAAGGTTTTACGTAGCTGAAGTCCTTCTTGCTTTGGAGTACTTGCACATGCTTGGAGTTGTTTACCGTGATTTAAAACCAGAAAACATTCTTGTTCGAGAAGATGGTCACATTATGCTCACAGATTTTGACCTTTCACTCAGGTGTGACGTTAGCCCAACGCTTCTGAAATCATCTTCTGATAAAGATCCTGCCAAGGTTTCTGGCCCATATGCAAAGTCAAGTTGCATTGAGCCATTCTGCATTGAACCATCTTGTCAAGTTTCATGCTTCAGTCCTAGATTCTTACCACCTGCGGCAAAAGCAAGGAAGCTAAAAGCCGATCTTGCTGCTCATATCAAATCACTGCCACAGCTCGTGGCAGAGCCCACGGATGCAAGATCAAATTCATTTGTTGGTACTCATGAATACCTAGCGCCCGAGATCATCAAAGGAGAAGGACATGGAGCTGCAGTCGATTGGTGGACATTTGGTGTTTTTCTTTATGAGCTTTTATATGGTAGAACACCCTTCAAAGGTTCTAATAACGAAGAAACATTAGCCAATGTCGTGTTGCAAAATCTCAGATTCCCAGATACCCCATTTGTTAGTTTCCAAGCGAGGGATCTTATCAAAGGGTTGTTAGTTAAAGAGCCAGAAAACCGTTTGGGTACAGAGAAAGGCGCTGCAGAGATTAAACAACATCCCTTCTTCGAGGGCCTTAACTGGGCCTTAATACGATGTGCTATCCCACCGGAACTTCCAGATCTTTGTGAATTTGAGTTGGGAGTTTCAGACATGATGGCAGAGTCACAAAGCAAGGGTGGTAAATATTTAGAATGTGCAACAACAGGAGAACAAGTGGAATTTGAGTTGTTTTAG 2613 0.4141 MGSFSGTCEIVEAREELNTVKDSGIYQSSSGYSKAEKNQKLPALKMGYKYNLDDDINKLFESITLKSSSRDLSYLPDGTSPRMKSALKKPMIVGIPRSPRVGTSEPVTLKQALRDLCISKASEMAATKRLSKSGASPRISEVGKIQTLYNSVVADDARRSGPSNVDSKRSSNEISLVLEESKSLALNKESRSHRTSESTSLSQNAHSSKIAVATTQNGNGASLMQSDLECSSSKVEDSLQSSEPSQIENQTSASSISCCNTNGSKVELREKDSSPKKLGNKASKNVRKGMLQTASSSSSSVNGSRVCKLSRSPRTVKLAIKNKDSGKKKLKQGSDSALSAPPCNETNNKPVPASTTPLVCERCWCEIENTNIENSKGIVTSGSLSPADGINLKSVLYGPASTGCNSSREVAKVKKNGRLKEQLEFSQSSKSSQGDYSSSTSTSDESNISGSSCGNRPHMSKDFRWQAIRDAQVQHRVLGLRHFNLLKKLGCGDIGTVYLSELIGQNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYAQFTSENLSCLVMEYCPGGDLHVLRQKQLGRCFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCDVSPTLLKSSSDKDPAKVSGPYAKSSCIEPFCIEPSCQVSCFSPRFLPPAAKARKLKADLAAHIKSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQNLRFPDTPFVSFQARDLIKGLLVKEPENRLGTEKGAAEIKQHPFFEGLNWALIRCAIPPELPDLCEFELGVSDMMAESQSKGGKYLECATTGEQVEFELF 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07195 870 MobiDBLite consensus disorder prediction 185 208 - -
Vivi1g07195 870 Gene3D Transferase(Phosphotransferase) domain 1 708 831 - -
Vivi1g07195 870 MobiDBLite consensus disorder prediction 337 354 - -
Vivi1g07195 870 ProSitePatterns Serine/Threonine protein kinases active-site signature. 604 616 IPR008271 GO:0004672|GO:0006468
Vivi1g07195 870 ProSiteProfiles Protein kinase domain profile. 483 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g07195 870 MobiDBLite consensus disorder prediction 221 354 - -
Vivi1g07195 870 SMART serkin_6 483 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g07195 870 MobiDBLite consensus disorder prediction 221 264 - -
Vivi1g07195 870 Pfam Protein kinase domain 484 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g07195 870 Pfam Protein kinase domain 712 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g07195 870 FunFam serine/threonine-protein kinase D6PK-like 567 634 - -
Vivi1g07195 870 MobiDBLite consensus disorder prediction 422 456 - -
Vivi1g07195 870 FunFam serine/threonine-protein kinase D6PK-like 710 833 - -
Vivi1g07195 870 MobiDBLite consensus disorder prediction 286 309 - -
Vivi1g07195 870 PANTHER FLIPPASE KINASE 1-RELATED 206 837 - -
Vivi1g07195 870 CDD STKc_phototropin_like 481 834 - -
Vivi1g07195 870 SUPERFAMILY Protein kinase-like (PK-like) 459 832 IPR011009 -
Vivi1g07195 870 Gene3D Phosphorylase Kinase; domain 1 481 562 - -
Vivi1g07195 870 MobiDBLite consensus disorder prediction 422 457 - -
Vivi1g07195 870 MobiDBLite consensus disorder prediction 317 331 - -
Vivi1g07195 870 Gene3D Transferase(Phosphotransferase) domain 1 563 631 - -
Vivi1g07195 870 FunFam Serine/threonine-protein kinase D6PK-like 481 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07195 Vivi-Chr1 176514410 176519063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07195 1 870 AGC Kinase Gene Family AT3G52890 52.599 0.0 851
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Vivi1g07195 Pkinase 2.7e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07195 - K08286 gmx:100813470 1303.5