Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07185 ATGATGGCTCAGAAGCACTTACATGAACTACTTCAAGAAGATCAAGAGCCATTTCTTCTAAACAACTACATTTCAGATAGACTTACCCAACTCAAAAGATTTGCACCAAACAACACTTTACAATTGAAGAAACATGAACATAAACCAACAACAAACGTTAACTTTTGCAAACACGCTTGTTTTTTCTCATTCCAAAACACACCGGATATAAGAAACTCACCGCTCAAAAGCCCGGTCAGATCCTCTAATGATCTCTTCCTCCAAATCCCAGCCAAAACGGCGTCGCTTTTACTCGACGCCGCTCTCAAAATCCACAACAAGAAACCCCATAGCAAAAACAAAAACAAATCTTTCGGGGTTTTCGGTTCATTTTTCAAGAAACTAACACAACGAAGCAGAACCAAAACTGAAGGTGATGTTTCCGTGAAGGATATTTTGAGGTGGGATTCAAGAAATAGGAAATCTTTCAACAAAGGTGGCACTGAGGTGTGTTCGTGTGAGGTGGGGTTCACGTGTTCTTGCAATGGAAGACATAGCAGTAGCGCCGTATGGTCTGAGAGCAACGAAGCAGAAACTTCGAGCAGTGGCCATTCACATTCTTGTGACTCTGTGGAAGACGTTGAGTTTGTGATGATGAACACCAAGAAACAAAATGTAGCAGATTGCGGTTGCTTTGATCAGCATGGGTTTTTCTGCGAAAGTCCTTTCCGTTTCATTCTTGAAAAGAGCCCTTCCACTTCCGGCCGTCGTACGCCGGAGTTTTCCTCGCCGGTGGAGTCACCTAGCCGCCACCAACCAGAGGACAAACAAAATAATGGAGTTGATGATGTTAAGAAATTCGAATCAGGAGAAGATGAAGAAGAGAAAGAACAATGTAGTCCAGTATCTGTTTTAGATACTCCTTTTGAAGATTATCATGATGATGATTGCCATGAAAATGACAATGAAGAAGATGATTTTGATTTGGATGGTAGCTACGCCAATGTACAAAGGACCAAGCAACAACTATTAGACCGGCTTCGAAGATTTGAGCAACTTGCGGAGTTAGATCCACTAGAACTTGAAAAAAGAATGCAAGAAGACAATGAGGAAACATTTTTCGAAGAGGATGATGATGAAGAAGATTGTGAAGAAAAGAGTCTTAGAGAAATGGTTTGTGAAATACTCTGCCATTCAAGTGATCATGAAAGATGGCAAGAGCAAGAAGCTCTTAAGAGACTTGTTTATGATCTCATTAAGGAGGAACTTAATTACTCACAAGATATGAACAATGTAGTGAAAAGGGTATGCAAGAAGATGGATTTGTGGAAAGAAGTGGAATGTAACACTATTGATATGATGATAGAGGAAGATTTCTCTAGAGAGAAAATTGGGTGGAAGAAAAATGATGAGGTGACAAAAGAGTTGGCTAGAGAGGTTGAGGTTGCTATCTTTTGTTTTCTTGTTGATGAATTTTCAGAGGAATTAGTATGTTAA 1476 0.3997 MMAQKHLHELLQEDQEPFLLNNYISDRLTQLKRFAPNNTLQLKKHEHKPTTNVNFCKHACFFSFQNTPDIRNSPLKSPVRSSNDLFLQIPAKTASLLLDAALKIHNKKPHSKNKNKSFGVFGSFFKKLTQRSRTKTEGDVSVKDILRWDSRNRKSFNKGGTEVCSCEVGFTCSCNGRHSSSAVWSESNEAETSSSGHSHSCDSVEDVEFVMMNTKKQNVADCGCFDQHGFFCESPFRFILEKSPSTSGRRTPEFSSPVESPSRHQPEDKQNNGVDDVKKFESGEDEEEKEQCSPVSVLDTPFEDYHDDDCHENDNEEDDFDLDGSYANVQRTKQQLLDRLRRFEQLAELDPLELEKRMQEDNEETFFEEDDDEEDCEEKSLREMVCEILCHSSDHERWQEQEALKRLVYDLIKEELNYSQDMNNVVKRVCKKMDLWKEVECNTIDMMIEEDFSREKIGWKKNDEVTKELAREVEVAIFCFLVDEFSEELVC 491
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07185 491 PANTHER OS04G0572500 PROTEIN 2 489 - -
Vivi1g07185 491 MobiDBLite consensus disorder prediction 243 261 - -
Vivi1g07185 491 MobiDBLite consensus disorder prediction 303 322 - -
Vivi1g07185 491 MobiDBLite consensus disorder prediction 243 298 - -
Vivi1g07185 491 MobiDBLite consensus disorder prediction 262 293 - -
Vivi1g07185 491 Pfam Domain of unknown function (DUF4378) 354 484 IPR025486 -
Vivi1g07185 491 Coils Coil 326 346 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vivi1g07185 Vivi-Chr1 176099837 176103176 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07185 1 328 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 38.400 4.51e-50 175
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07185 - - gmx:100782984 451.44
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g07185 1 176099837 176103176 Vivi1g07185 1 176099837 176103176 ECH
Vivi6g05789 6 164604907 164608474 Vivi1g07185 1 176099837 176103176 PCT