Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07176 ATGGATAATGGTGAAGATGCTGATGATGTCGGGAGGAACAATGGTAGTTATGTGGATAATGAAGAAGGAAAAGAGGATTTGGATGATTACAAAGATATAGGTGAAATCTCAGATGATGATATAAGAGATATGAAATTTGAATCAGAGAAAAAAGCTTGTGAGTTTTATGAAACATATGCAGAATATCATGGGTTTGCGGTAAGAAGAGATGAGATTGACTGTGATTTCAAAAAAAATATTATTATGCGCCAATTAGTTTGTAATAGAGAGGGGAAAAGACATAAGAAACATATGTTAAGGGTGGATCGACATAGGGGGCCAAGGCCAATCACTCGAACAGGTTGTCTTGCTCGGTTACGTGTGGCATATGATGTAGTGACTAGAAGTTGGAGAGTTGTTGCATTTGAATCCGCTCATAATCATAAGTTAACTCCACAGCGGTTTGTTCATTTTATTCCTAAGTATCGTCGACTGAGTGAAGCTGATAAAGCGCTTGTTGATGGCTTGCATACATGTGGTGTTAGAACATGTCATATTTTGGGTTTTATGTTGGGTCAGAAAGGTGGTCATGAAGATTTGGGATTTATCAAGAAGGACCTATATAATTATTTTAGTAATGGAGCCAAGGCTAAAAGAGAAAATGGAGATGCTTTTGCTGCTTTGTCTTATTTACAAGCTAAAGCCGACAATGATCCGATGTTTTTTTCGAAGTTTACCACAACAGAGGATGGCCGTCTACAAAATTTATTTTGGTCAGATGGAACTAGCCGATTTGACTTTGAATGTTTTGGTGATGTGGTTGCATTTGACACGACCTACAAAAAGAACAGGTACAACAAACCCTTTGTTATTTTTTGTGGGTACAATCATCATGGTGAAACTACAATATTTGGGTGTGCTTTAATTTCAGACGAAAAGACAGAGACATATAAGTGGGTTTTAAATGCCTTTTCTGAAGCAATGTTCCATAAATGTCCAAATGTATTTGTTACTGACGGAGATGGTGCGATGCGGGAAGCTATTAGAGTTGAATTTCCAAATGCGTCACATCGCCTCTGTTTATGGCATTTACATCAAAATGCTATTGAGAATGTCAAGAATTCAAAGTTCCTAGAAGAGTTTAAGTGA 1128 0.3723 MDNGEDADDVGRNNGSYVDNEEGKEDLDDYKDIGEISDDDIRDMKFESEKKACEFYETYAEYHGFAVRRDEIDCDFKKNIIMRQLVCNREGKRHKKHMLRVDRHRGPRPITRTGCLARLRVAYDVVTRSWRVVAFESAHNHKLTPQRFVHFIPKYRRLSEADKALVDGLHTCGVRTCHILGFMLGQKGGHEDLGFIKKDLYNYFSNGAKAKRENGDAFAALSYLQAKADNDPMFFSKFTTTEDGRLQNLFWSDGTSRFDFECFGDVVAFDTTYKKNRYNKPFVIFCGYNHHGETTIFGCALISDEKTETYKWVLNAFSEAMFHKCPNVFVTDGDGAMREAIRVEFPNASHRLCLWHLHQNAIENVKNSKFLEEFK 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07176 375 MobiDBLite consensus disorder prediction 1 29 - -
Vivi1g07176 375 Pfam FAR1 DNA-binding domain 54 144 IPR004330 -
Vivi1g07176 375 Pfam MULE transposase domain 266 360 IPR018289 -
Vivi1g07176 375 PANTHER OS01G0519700 PROTEIN 41 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07176 Vivi-Chr1 175319703 175323158 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi1g07176 MULE 3.2e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07176 - - vvo:131629359 763.837