Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07168 ATGGAAGACCACCATAACAACCATACTCCTCACCACCACCCCCAACACCATCACCACCATCATCCACAACAATACACCACCATGTCAACTGATCTACGACAACTAGTTAACGGAACAAGGTCAACCCATTTCAGTCCAATACCAACAGCAGCAGATGAGTTTTTCACCGGTCACCGGAATCTGACTGCGTTGTTAACCACATCACATCCAAACGACCAACAGCAACAACAACAACAACAGTTCGAGATGATGATGTTGGGTCGTGGTGTTAATGTTCTTGAAGACTTCAATAACATAACCACTCATCATGTTCAACCTCCTCCAACAGCAACAACCACCACCACCACCACCGCCAGTGTCTCAACTCCTGAAACCACCGGTTGTATCGGCGGAGACGCGTCAACCGGAAGATGGCCCAGACAAGAAACTCTCACTCTTCTTGAGATCAGATCTCGTCTTGACCCTAAATTCAAAGAAGCTAATCAAAAGGGTCCCTTATGGGATGAAGTTTCTAGGATAATGTGTGAAGAACATGGATATCAAAGGAATGGAAAAAAGTGCAGGGAGAAATTTGAGAATCTATACAAGTATTACAAGAAGACAAAAGAAGGTAAAGCAGGAAGGCATGATGGTAAGAATTACAGATTCTTTCGTCAACTTGAAGCTTTGTATGGTGAAAACAGTAACCAAACTTCTCAACCAGAAACCAATTTTGTCAACAACTTCAATTTTCAAAACCCTTCAAAAACAACTACAAACCAAGAGGGTTTTCATAATAATGATCATAGCTTAAGTCTCACTACTAACTCGACTGACTTTGAGATCGATACTTCGTCGTCGGATGACGAGAAGGGAAAGAGGAAGAGTAGTGGAAGGAGGAGTTGGAAGGTGAAGATAAAGGAGTTCATTGACTCACAAATGAAGAAGCTTGTGGATAAGCAAGAGGAGTGGTTGAGTAAACTTGTGAAGACACTTGAGGATAAGGAAAAGGAGAGGGTTTTGAGAGAGGAGGAGTGGAGGACGCAAGAAGCGAAAAGGGTGGAAAAGGAACAAAGGTTTTGGAGTAAAGAGAGAGCTTGGATTGAAGCTAGGGATGCTGCTTTAATGGAGGCTTTGAAGAATATAGGTGGAAGAGAAATGAAGGTTGAGCTTGAAGGTCATAATCATAAGGGTGTAAATGTAATAACTGAGGGTGAGATTCATCAAAGCAACATTGAAAACCAAAATGAAGATGGGAGTGAAATATTGAATAGTACTGTGAGAGGTACTACTGATAATAACTATCAAAGGGATTCTTTATCTTTACAAGAAGGAAACAAGAAGAGAAAGGAGAATTTTTACTTCAACAATAATGAGCAATGTTCTATGTACAATCAAGGTAGTGGTTATTGTGATGTTAATCATCAAAGAGAAGAGATTGTGAAGCTACAAAGAAATGTTGATCACGGTTCTTCGCCTTCTGATTCTAACGTTGGTAATGTTGCTAATGGTGATGCTTGCTTTCCGTTCTTGATTAACGAGGGTGGAAGTTTGTGGGAGAATTTCGGGTTGAAGATCAATAAATCAAACCAAAACAACTGA 1581 0.4073 MEDHHNNHTPHHHPQHHHHHHPQQYTTMSTDLRQLVNGTRSTHFSPIPTAADEFFTGHRNLTALLTTSHPNDQQQQQQQQFEMMMLGRGVNVLEDFNNITTHHVQPPPTATTTTTTTASVSTPETTGCIGGDASTGRWPRQETLTLLEIRSRLDPKFKEANQKGPLWDEVSRIMCEEHGYQRNGKKCREKFENLYKYYKKTKEGKAGRHDGKNYRFFRQLEALYGENSNQTSQPETNFVNNFNFQNPSKTTTNQEGFHNNDHSLSLTTNSTDFEIDTSSSDDEKGKRKSSGRRSWKVKIKEFIDSQMKKLVDKQEEWLSKLVKTLEDKEKERVLREEEWRTQEAKRVEKEQRFWSKERAWIEARDAALMEALKNIGGREMKVELEGHNHKGVNVITEGEIHQSNIENQNEDGSEILNSTVRGTTDNNYQRDSLSLQEGNKKRKENFYFNNNEQCSMYNQGSGYCDVNHQREEIVKLQRNVDHGSSPSDSNVGNVANGDACFPFLINEGGSLWENFGLKINKSNQNN 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07168 526 Pfam Myb/SANT-like DNA-binding domain 137 223 IPR044822 -
Vivi1g07168 526 ProSiteProfiles Myb-like domain profile. 130 195 IPR001005 -
Vivi1g07168 526 MobiDBLite consensus disorder prediction 1 27 - -
Vivi1g07168 526 MobiDBLite consensus disorder prediction 227 290 - -
Vivi1g07168 526 Gene3D - 138 200 - -
Vivi1g07168 526 PANTHER FI21293P1 78 403 - -
Vivi1g07168 526 MobiDBLite consensus disorder prediction 227 275 - -
Vivi1g07168 526 MobiDBLite consensus disorder prediction 101 135 - -
Vivi1g07168 526 MobiDBLite consensus disorder prediction 101 129 - -
Vivi1g07168 526 CDD GT1 137 202 - -
Vivi1g07168 526 FunFam trihelix transcription factor PTL-like 138 200 - -
Vivi1g07168 526 MobiDBLite consensus disorder prediction 410 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07168 Vivi-Chr1 174951886 174955530 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07168 95 521 Trihelix Transcription Factor Family AT5G03680 40.893 1.07e-103 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vivi1g07168 Myb_DNA-bind_4 1.8e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07168 - - vvo:131644681 1004.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g07168 1 174951886 174955530 Vivi1g07168 1 174951886 174955530 ECH