Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07148 ATGGCATGCATGTGGCGCAAGAATGCCTGCAGTGGGAAGAAACCACCGTCAGACGTGCCGAGAGGTCACCTGGCTGTGACTGTAGGAGAGGCAAACAGGAGGTTTGTGATAAGAGCTGACTACCTGAATCATCCAGTGCTTCAACAACTGCTAGACCAAGCATATGAAGGATATGGATTTAACAAGAGTGGTCCTCTGGCTATACCTTGTGATGAGTTGCTATTTGAAGATATTCTTCATTCACTTGGAGGAGGGACACAGACACAGACACGCCGATCCTCTTCGCATGTGCTTACAAAAAAGCTAGAATTGTGCTTTTCCAAAGACTCAGTACCGCTACTTGAAGCTTTTGACAGCAAAAGGAGCAATAACTATAAGCATTGA 384 0.4583 MACMWRKNACSGKKPPSDVPRGHLAVTVGEANRRFVIRADYLNHPVLQQLLDQAYEGYGFNKSGPLAIPCDELLFEDILHSLGGGTQTQTRRSSSHVLTKKLELCFSKDSVPLLEAFDSKRSNNYKH 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07148 127 Pfam Auxin responsive protein 10 82 IPR003676 GO:0009733
Vivi1g07148 127 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 13 78 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07148 Vivi-Chr1 173577822 173578723 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07148 1 79 Calmodulin-binding Proteins AT4G34750 57.317 5.53e-28 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07148 K14488 - gmx:100777611 180.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g07148 1 173577822 173578723 Vivi1g07148 1 173577822 173578723 ECH