Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07147 ATGATGATGAACTCTATCATCATCTTCTTCTTCTTCTTCCTCTTTCTCACCATCTACATTGTACCATGTTTATCCTATAATGACACACATGCACTTACTCTCTTCCGTCAACAAACCGACACTCACGGCCAACTCCTCGCCAACTGGACCGGACACGATGCATGCTCGGGTACATGGCACGGCGTTGTTTGCTCCCCAAACAACCGTGTCACCACTCTCACACTTCATTCCCTCAACCTTCGAGGACCCATCGACGCTCTCGCTCCTCTCACTCATCTTCGCCTCCTTGATCTCCATAATAACCGTCTAAACGGTAACGTTTCAGCTTCTGTCCTTTCCAACTGCACCAATCTTAAACTCCTCTACCTCGCCGGAAACGACTTCTCCGGTCAAATCCCATCTGAAATCTCCTCCTTGATTAACCTCCTCCGTCTCGACCTCTCCGATAACAACCTCGCCGGAGAAATTCCCAATGAAATCTCCCGTTTGACTAGCCTCCTCACTCTGAGGCTTCAGAACAACGCACTCTCCGGTAACATCCCGGATATCTCCTCCGCCATGCCGAATCTCACAGAACTCAACATGACAAACAACGAATTCTACGGCCATATACCAAACTCAATGCTAGCGAAATTCAGTGACGAAAGCTTCTCTGGTAACGAAGGTTTATGCGGTTCAAAACCGTTTCAAGTTTGCTCCTCCACGGAGAAAACTCCTCCTTCATCTGAACCGGTTCAGACCGTCCCTTCAAACCCGAGTACTTTCCCTGAAACAAGCGTTATCGCAAGACCAAGAAGCCATCACCGTAAAGGGTTAAGCCCTGGCGCAATTGTAGCCATTGTGGTAGCAAACTGTGTTGCATTGTTAGTTATAACATCGTTCGTTGTTGCTCACTGTTGTGCTAAAGGGAGAGGTGTTAATAGTAATTCCATAATGGGTAGTGAGACTGGAAATGGAAAGAGGAAAAGTTATGGTAGTGAAAAGAAGGTGTATAATACAAATGGTGGAGGTGGTGATAGTAGTGATGGGACTAGTGGAACTGATATGAGTAAGCTTGTGTTTTTTGATAGAAGGAATGGATTTGAGTTGGAGGATCTGTTACGTGCTTCTGCTGAGATGCTTGGGAAGGGAAGTTTAGGAACTGTTTATAGAGCAGTGCTTGATGATGGTAGTACAGTTGCTGTTAAGAGGTTAAAAGATGCAAATCCATGTGCTAGGCATGAGTTTGAGCAGTATATGGATGTGATTGGGAAGCTTAAACATCCCAATATTGTTAAACTAAGAGCTTATTATTATGCCAAGGAAGAAAAACTTCTTGTCTATGATTATCTCTCCAATGGAAGCTTGCATGCTCTTCTTCATGGGAACCGTGGACCGGGGAGGATTCCGTTGGATTGGACGACAAGAATAAGCTTGGTGTTAGGAGCAGCAAGAGGGCTTGCTAGGATTCATACAGAGTATAGTGCAGCAAAAGTGCCTCATGGGAACGTGAAATCGTCCAATGTACTACTTGACAAGAACGGTGTTGCTTGCATATCTGATTTTGGACTATCACTACTGTTGAACCCTGTTCATGCAATTGCAAGACTGGGAGGGTACAGAGCACCTGAACAAACAGAACAGAAAAGGCTGTCTCAGCAAGCTGATGTATACAGTTTTGGAGTGTTGCTGTTGGAAGTTCTCACAGGGAGAGCACCTTCGTTACAGTATCCGTCTCCGGGGACTCGTCATCGTAAAGATGAAGAGGAAGAAAATGTGGTGGATCTACCGAAATGGGTTCGATCTGTTGTGAGAGAAGAGTGGACTGGAGAGGTTTTTGATCAAGAACTTCTGAGGTACAAGAATATTGAGGAAGAGCTTGTGTCAATGCTGCATGTTGGTTTAGCTTGTGTGGCGCAGCAGCCAGAGAAGAGGCCAACTATGGTAGATGTTGTTAAGATGATTGAGGATATCAGGGTGGAGCAATCTCCTCTGTGTGAGGACTATGATGAATCGCGCAATTCACTTTCACCTTCCATTCCCACCACTGAAGATGGTCTTGTTTAG 2046 0.4545 MMMNSIIIFFFFFLFLTIYIVPCLSYNDTHALTLFRQQTDTHGQLLANWTGHDACSGTWHGVVCSPNNRVTTLTLHSLNLRGPIDALAPLTHLRLLDLHNNRLNGNVSASVLSNCTNLKLLYLAGNDFSGQIPSEISSLINLLRLDLSDNNLAGEIPNEISRLTSLLTLRLQNNALSGNIPDISSAMPNLTELNMTNNEFYGHIPNSMLAKFSDESFSGNEGLCGSKPFQVCSSTEKTPPSSEPVQTVPSNPSTFPETSVIARPRSHHRKGLSPGAIVAIVVANCVALLVITSFVVAHCCAKGRGVNSNSIMGSETGNGKRKSYGSEKKVYNTNGGGGDSSDGTSGTDMSKLVFFDRRNGFELEDLLRASAEMLGKGSLGTVYRAVLDDGSTVAVKRLKDANPCARHEFEQYMDVIGKLKHPNIVKLRAYYYAKEEKLLVYDYLSNGSLHALLHGNRGPGRIPLDWTTRISLVLGAARGLARIHTEYSAAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVHAIARLGGYRAPEQTEQKRLSQQADVYSFGVLLLEVLTGRAPSLQYPSPGTRHRKDEEEENVVDLPKWVRSVVREEWTGEVFDQELLRYKNIEEELVSMLHVGLACVAQQPEKRPTMVDVVKMIEDIRVEQSPLCEDYDESRNSLSPSIPTTEDGLV 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07147 681 FunFam Nuclear pore complex protein NUP107 25 182 - -
Vivi1g07147 681 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Vivi1g07147 681 Gene3D Phosphorylase Kinase; domain 1 345 443 - -
Vivi1g07147 681 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 444 660 - -
Vivi1g07147 681 CDD STKc_IRAK 374 651 - -
Vivi1g07147 681 SUPERFAMILY Protein kinase-like (PK-like) 372 648 IPR011009 -
Vivi1g07147 681 SUPERFAMILY L domain-like 25 209 - -
Vivi1g07147 681 Gene3D Transferase(Phosphotransferase) domain 1 444 669 - -
Vivi1g07147 681 FunFam pollen receptor-like kinase 1 338 443 - -
Vivi1g07147 681 MobiDBLite consensus disorder prediction 328 345 - -
Vivi1g07147 681 ProSiteProfiles Protein kinase domain profile. 368 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g07147 681 MobiDBLite consensus disorder prediction 310 345 - -
Vivi1g07147 681 Gene3D Ribonuclease Inhibitor 23 89 IPR032675 -
Vivi1g07147 681 Gene3D Ribonuclease Inhibitor 90 239 IPR032675 -
Vivi1g07147 681 MobiDBLite consensus disorder prediction 659 681 - -
Vivi1g07147 681 Pfam Protein kinase domain 372 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g07147 681 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 653 IPR046959 -
Vivi1g07147 681 SMART LRR_typ_2 139 163 IPR003591 -
Vivi1g07147 681 SMART LRR_typ_2 90 114 IPR003591 -
Vivi1g07147 681 SMART LRR_typ_2 187 211 IPR003591 -
Vivi1g07147 681 MobiDBLite consensus disorder prediction 233 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07147 Vivi-Chr1 173461521 173464081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07147 24 677 Receptor kinase-like Gene Family AT2G36570 66.119 0.0 855
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi1g07147 Pkinase 1.2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07147 - - gmx:102660494 968.378