Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07141 ATGATGGAACCCAATGGAATGTTTTCTCCCATCACTACTTCTGGTTTTGTAGGAGTAGTTGATAATAATATCTCTTTACAGCAGCAGCAACAACAACAACAGCAACAAAACCTCCCTATTCAACAACAAAATCCCCACCATTTGCACCTTTCCCAAGCTGTTTCCTATGCTCCACATGCTCATGACAGTGACACACATCATCAACAGCATCAACAACAACAGTTACATCAATCAATGAAACACGGGTACCCTCCTTTTTCTTCATCCAGGAGCAAACAGCAGCAGCAAGGTTCTCAGGTTAGTGATGAGGATGAGCCAAGTTTTCAAGCGGATGAAACTTCTGGTGGTGGTGACCTGAAGAGGAAATTTTCGCCTTGGCAAAGAATGAAATGGACTGATACAATGGTGAGGCTTTTGATAATGGCTGTTTATTACATTGGGGATGAAGGTGGTTCTGAAGGGACTGATGCAATGGGTAATAAGAAGAAAGCAAGTGGTTTGTTGCAGAAGAAGGGGAAATGGAAATCTGTTTCAAGGGCTATGATGGAAAAAGGGTTTTATGTTTCACCTCAACAATGTGAAGATAAGTTCAATGATTTGAATAAGAGGTATAAGAGGGTGAATGATATTCTTGGAAAAGGGACAGCTTGTAGGGTTGTTGAAAATCAGAATTTGTTGGATTCAATGGATTTGACACCTAAGATGAAAGATGAAGTTAGGAAATTGCTGAATTCTAAGCATCTTTTCTTTAGGGAAATGTGTGCTTATCATAATAGTTGTGGTCATGCTGGGGGTGGTTCTAATGTTCAACTTCAGGTAGAAGGTGGAAGTGGAACAACAACACCTCAGAATCAACCTCAACAACATCAACAGCAGCCACAACAATCGCAGCAGCAACAACAACAACAACAACAACAATGTTTTCATTCAACAGAAAATGGTGTTGGGAATTTGAGTGGTTCAGGTTTGAGGATGTTGAAAATGGGAAATGGAGAAGCTGAAGAGGAGGAGGATGAAGACGAAGACGATGAATCAGAGGACTTTTCTGATGAGGATGAAGATGAATCAGGAGAAGGTGGTTCAAAGTGTCAACCAGATGAAGATGAGAATGATGGAAAACCATCAAGGAAAAGGCGAAGAAAAGGAGGACTTCCCGTTTCTATGTCATCATCATCATTACCATTGATGAATCAAATTAGCAATGAAATAAGCGGTGTCTTTCAAGATGGTGGCAAGAGTCCATGGGAGAAAAAGCAATGGATGAGAAACAGAATTTTGCAGTTGGAGGAACAGAAAATAAGCTATGAATCACAAGCTTTTGAGTTGGAAAAACAAAGGTTAAAATGGGCAAGGTATAGTAGCAAGAAAGAGAGGGAAATGAAGAGAGCAAAACTTGAAAATGAAAGGAGAAGATTAGAAAATGAAAGAATGGTTTTGCTTATTAGGAAGAAGGAGATTGAATTGATGAATATTCAACAGCAACAGCTTCAACAACAACAGCAACATTCTTCTACTTAG 1518 0.3959 MMEPNGMFSPITTSGFVGVVDNNISLQQQQQQQQQQNLPIQQQNPHHLHLSQAVSYAPHAHDSDTHHQQHQQQQLHQSMKHGYPPFSSSRSKQQQQGSQVSDEDEPSFQADETSGGGDLKRKFSPWQRMKWTDTMVRLLIMAVYYIGDEGGSEGTDAMGNKKKASGLLQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQNLLDSMDLTPKMKDEVRKLLNSKHLFFREMCAYHNSCGHAGGGSNVQLQVEGGSGTTTPQNQPQQHQQQPQQSQQQQQQQQQQCFHSTENGVGNLSGSGLRMLKMGNGEAEEEEDEDEDDESEDFSDEDEDESGEGGSKCQPDEDENDGKPSRKRRRKGGLPVSMSSSSLPLMNQISNEISGVFQDGGKSPWEKKQWMRNRILQLEEQKISYESQAFELEKQRLKWARYSSKKEREMKRAKLENERRRLENERMVLLIRKKEIELMNIQQQQLQQQQQHSST 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07141 505 MobiDBLite consensus disorder prediction 267 392 - -
Vivi1g07141 505 MobiDBLite consensus disorder prediction 27 122 - -
Vivi1g07141 505 Gene3D - 131 206 - -
Vivi1g07141 505 MobiDBLite consensus disorder prediction 70 104 - -
Vivi1g07141 505 Coils Coil 455 501 - -
Vivi1g07141 505 Coils Coil 425 445 - -
Vivi1g07141 505 MobiDBLite consensus disorder prediction 358 376 - -
Vivi1g07141 505 MobiDBLite consensus disorder prediction 27 50 - -
Vivi1g07141 505 MobiDBLite consensus disorder prediction 332 357 - -
Vivi1g07141 505 Pfam Myb/SANT-like DNA-binding domain 128 255 IPR044822 -
Vivi1g07141 505 PANTHER F16F4.11 PROTEIN-RELATED 14 493 - -
Vivi1g07141 505 MobiDBLite consensus disorder prediction 267 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07141 Vivi-Chr1 173394041 173396079 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vivi1g07141 Myb_DNA-bind_4 1.6e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07141 - - tpra:123902711 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g07141 1 173394041 173396079 Vivi1g07141 1 173394041 173396079 ECH
Vivi6g05818 6 165514115 165515810 Vivi1g07141 1 173394041 173396079 PCT