Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07139 ATGGTTGTGTTAAAAAATTTGTTGGGTGTTACAAACAAGCTGTTCATGGAAAAAAGTGAGGCATCAGAGAAAGATATCTTAATCAATGCGCATGCTTTTTATGAACAAGATGAAGGTGCACCATTCAATCTTGAGTATGCATGGCGGCTTTTAAAAGATGAACCTAAATGGATGGGAGTATTCACCAAAAATTCTTCAAAGAGAACAAAGAATTCTGCTAGTGGTTCATACACGGCATCGCCAAACTCAGAGACACCTTCAAGTTATGAGTTAAACTCATCATCTCCAATGGAGCGTCCAATGGGACAAAAGGCGGCAAAACGAAAAGGTAAGGCAAAGGAAAATGCAAATGAACCTCCTTCTAGTGTTATTTTCGATACAAGGAATAAGAGAATGGAAGTAATGGAAAATCTAGCACGACTTAAGGAGGAAGAAAACAAATTAGTCAAGGAAAAGATGGAGTTTGAAGCAATGCAATTCATAATGTCAGACACTTCTAAGATGAATGATAGTCAACGTGAATTTCATGAAAAACGTTGTAATAACCTAAAGCAAAAATACGGATGTATTACAGGTTCAAATAATGGCATTAATGTGCCAAACCAATCCAATGTGTTTAACGATATTTTGGAAGGACGTGCTGCTACTGTGCAATATACAATCAATGGGACTCCATATAACATGGGGTATTATTTAGCAGATGGCGAACGACACACATATGGAGGTGATTTTGATTACTCTTATGATAATGTAGACGACACCTACTCTACAACGGAAACATTTAACGGTCCTCATCCGAATCTTGCAACAAGACTACAAAGAAGAGCAACTCTTCGTGAAAAACAAGTTCATCGCAAACTTCAAGGAGATCTAATCAAGCATATTTGGGAACGTTTTGGACATGAGGATGATGTAAATTAA 921 0.3724 MVVLKNLLGVTNKLFMEKSEASEKDILINAHAFYEQDEGAPFNLEYAWRLLKDEPKWMGVFTKNSSKRTKNSASGSYTASPNSETPSSYELNSSSPMERPMGQKAAKRKGKAKENANEPPSSVIFDTRNKRMEVMENLARLKEEENKLVKEKMEFEAMQFIMSDTSKMNDSQREFHEKRCNNLKQKYGCITGSNNGINVPNQSNVFNDILEGRAATVQYTINGTPYNMGYYLADGERHTYGGDFDYSYDNVDDTYSTTETFNGPHPNLATRLQRRATLREKQVHRKLQGDLIKHIWERFGHEDDVN 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07139 306 Coils Coil 124 158 - -
Vivi1g07139 306 MobiDBLite consensus disorder prediction 65 123 - -
Vivi1g07139 306 MobiDBLite consensus disorder prediction 65 99 - -
Vivi1g07139 306 Pfam No apical meristem-associated C-terminal domain 41 178 IPR029466 -
Vivi1g07139 306 Pfam Plant transposon protein 187 236 IPR006912 -
Vivi1g07139 306 PANTHER - 17 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07139 Vivi-Chr1 173374463 173376607 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07139 19 145 Glutathione S-transferase Gene Family AT5G41240 34.074 2.20e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07139 - - vvo:131658842 362.459