Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07133 ATGGTTTTTGAGTATCTTGGGGATAACCTCCTAACTCTTATTAAGTATAGTGATTATCGTGGAATGCCTATTAACATGGTTAAAGAGATATGCTATCATATTTTGGTTGGATTGGATTACTTACATAGACAGCTTTCTATCATACATACGGACTTGAAGCCCGAAAATATCCTTCTTTTATCAGCGATAGATCCGTCTAAGGATCCTAGAAAATCTGGCGCTCCTCTTATTCTTCCTAACAGTAAAGACAAAACGCTAGAGTCGACGGTTTCAAGAGACACAAAAACATCCAATGGAGATTTGTTTAAGAATCATAAGAAAAATATTAAGAGAAAGGCTAAGCAAGCAGCTCATGGATGTGCTGAGAAGGAAGCATCTGAAGGAGTTGATGGTAATCCTGAAACCTCTGGTGCTGTAGAATCATCTCCCCATGCAAGTTCTGCAAGAGAACAAACTTCTAATTCTGCTGGCACTAGTAAGATATCAGATGCTGATGAAGCGAAGTCAAAAGAGCAGGGCAACAGAAGAGGGAGCAGACAGAAACTGCTTGCCTCTGTTGATAACAAATGCAAGTTAGTTGACTTCGGTAATGCTTGCTGGACATATAAACAGTTTACAAATGATATTCAGACTAGGCAATATCGGTGCCCAGAGGTAATCCTTGGATCAAAATATTCTACATCAGCAGATCTTTGGTCGTTTGCTTGCATATGTTTTGAGCTTGCAACTGGAGACGTGTTATTTGATCCTCATAGTGGCGACAACTTTGATAGGGATGAGGACCACTTGGCATTAATGATGGAACTTCTTGGAATGATGCCGCGTAAGATTGCACTAGGGGGGCGTTATTCCCGGGATTTCTTCAATAGATATGGTGATTTGAGACATATCCGTCGGTTACGATTCTGGCCGTTAACTAAAGTGCTCACGGAGAAGTATGATTTTAATGAGAAAGATGCAAGTGACATGAGTGACTTTTTGGTTTCTATCCTTGACTTTGTTCCTGAGAAACGACCTACAGCTGGTCAATGCCTGCTACATCCATGGATGAATGCAGGTCCGCGTACTTTGGAACCATCAGTGCCTTCTTCTAATCACAACCCTGCTGCTGAAACTGCTACTTCTGACCAGAAGAATAAGGACAAAGATGAGAGGGAGGCCATGGAGGCTGGAATGGGAAATATTGCTATCAATTCAGATTGTAAGCCACTAATGCATTCACCATCAAATAAAAAGCCTCTCAAGGCAGCAGCAAGTAGTTCATCATGA 1269 0.4137 MVFEYLGDNLLTLIKYSDYRGMPINMVKEICYHILVGLDYLHRQLSIIHTDLKPENILLLSAIDPSKDPRKSGAPLILPNSKDKTLESTVSRDTKTSNGDLFKNHKKNIKRKAKQAAHGCAEKEASEGVDGNPETSGAVESSPHASSAREQTSNSAGTSKISDADEAKSKEQGNRRGSRQKLLASVDNKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTSADLWSFACICFELATGDVLFDPHSGDNFDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPLTKVLTEKYDFNEKDASDMSDFLVSILDFVPEKRPTAGQCLLHPWMNAGPRTLEPSVPSSNHNPAAETATSDQKNKDKDEREAMEAGMGNIAINSDCKPLMHSPSNKKPLKAAASSSS 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07133 422 MobiDBLite consensus disorder prediction 135 162 - -
Vivi1g07133 422 SUPERFAMILY Protein kinase-like (PK-like) 1 363 IPR011009 -
Vivi1g07133 422 SMART serkin_6 1 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g07133 422 Gene3D Transferase(Phosphotransferase) domain 1 185 350 - -
Vivi1g07133 422 MobiDBLite consensus disorder prediction 115 129 - -
Vivi1g07133 422 MobiDBLite consensus disorder prediction 163 177 - -
Vivi1g07133 422 MobiDBLite consensus disorder prediction 375 389 - -
Vivi1g07133 422 FunFam Serine/threonine-protein kinase SRPK-like protein 180 350 - -
Vivi1g07133 422 ProSiteProfiles Protein kinase domain profile. 1 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g07133 422 MobiDBLite consensus disorder prediction 357 374 - -
Vivi1g07133 422 Gene3D Transferase(Phosphotransferase) domain 1 6 66 - -
Vivi1g07133 422 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 1 382 - -
Vivi1g07133 422 MobiDBLite consensus disorder prediction 355 422 - -
Vivi1g07133 422 Pfam Protein kinase domain 1 60 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g07133 422 Pfam Protein kinase domain 182 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g07133 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 47 59 IPR008271 GO:0004672|GO:0006468
Vivi1g07133 422 MobiDBLite consensus disorder prediction 68 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07133 Vivi-Chr1 173070257 173074965 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07133 1 398 EF-hand Containing Proteins AT5G22840 66.420 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Vivi1g07133 Pkinase 6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07133 K08832 - gmx:100803070 721.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g07133 1 173070257 173074965 Vivi1g07133 1 173070257 173074965 ECH