Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07132 ATGGGTGACACCAATACCGAAAGCAGCGATTTCACCTCCGAAGACGAAGGCACCGAAGATTACCGACGCGGCGGCTACCACGCCGTCCGAATCGGCGACACTTTCAACTCCGGTCGGTATGTCGTTCAGAGCAAGCTTGGGTGGGGCCATTTCTCTACTGTCTGGCTCGCTTGGGATACTCATCATTCTAGATATGTGGCTTTGAAAGTTCAAAAAAGTGCTCAGCATTACACCGAGGCTGCCCTAGATGAGATAACTATTTTGCAGCAGATTGCGGAGGGAGACAAGGATGATAAAAAATGTGTGGTTAAGCTTTTGGACCATTTCAAGCATTTTGGTCCGAATGGACAGCATGTTTGTATGGTTTTTGAGTATCTTGGGGATAACCTCCTAACTCTTATTAAGTATAGTGATTATCGTGGAATGCCTATTAACATGGTTAAAGAGATATGCTATCATATTTTGGTTGGATTGGATTACTTACATAGACAGCTTTCTATCATACATACGGACTTGAAGCCCGAAAATATCCTTCTTTTATCAGCGATAGATCCGTCTAAGGATCCTAGAAAATCTGGCGCTCCTCTTATTCTTCCTAACAGTAAAGACAAAACGCTAGAGTCGACGGTTTCAAGAGACACAAAAACATCCAATGGAGATTTGTTTAAGAATCATAAGAAAAATATTAAGAGAAAGGCTAAGCAAGCAGCTCATGGATGTGCTGAGAAGGAAGCATCTGAAGGAGTTGATGGTAATCCTGAAACCTCTGGTGCTGTAGAATCATCTCCCCATGCAAGTTCTGCAAGAGAACAAACTTCTAATTCTGCTGGCACTAGTAAGATATCAGATGCTGATGAAGCGAAGTCAAAAGAGCAGGGCAACAGAAGAGGGAGCAGACAGAAACTGCTTGCCTCTGTTGATAACAAATGCAAGTTAGTTGACTTCGGTAATGCTTGCTGGACATATAAACAGTTTACAAATGATATTCAGACTAGGCAATATCGGTGCCCAGAGGTAATCCTTGGATCAAAATATTCTACATCAGCAGATCTTTGGTCGTTTGCTTGCATATGTTTTGAGCTTGCAACTGGAGACGTGTTATTTGATCCTCATAGTGGCGACAACTTTGATAGGGATGAGGACCACTTGGCATTAATGATGGAACTTCTTGGAATGATGCCGCGTAAGATTGCACTAGGGGGGCGTTATTCCCGGGATTTCTTCAATAGATATGGTGATTTGAGACATATCCGTCGGTTACGATTCTGGCCGTTAACTAAAGTGCTCACGGAGAAGTATGATTTTAATGAGAAAGATGCAAGTGACATGAGTGACTTTTTGGTTTCTATCCTTGACTTTGTTCCTGAGAAACGACCTACAGCTGGTCAATGCCTGCTACATCCATGGATGAATGCAGGTCCGCGTACTTTGGAACCATCAGTGCCTTCTTCTAATCACAACCCTGCTGCTGAAACTGCTACTTCTGACCAGAAGAATAAGGACAAAGATGAGAGGGAGGCCATGGAGGCTGGAATGGGAAATATTGCTATCAATTCAGATTGTAAGCCACTAATGCATTCACCATCAAATAAAAAGCCTCTCAAGGCAGCAGCAAGTAGTTCATCATGA 1629 0.4303 MGDTNTESSDFTSEDEGTEDYRRGGYHAVRIGDTFNSGRYVVQSKLGWGHFSTVWLAWDTHHSRYVALKVQKSAQHYTEAALDEITILQQIAEGDKDDKKCVVKLLDHFKHFGPNGQHVCMVFEYLGDNLLTLIKYSDYRGMPINMVKEICYHILVGLDYLHRQLSIIHTDLKPENILLLSAIDPSKDPRKSGAPLILPNSKDKTLESTVSRDTKTSNGDLFKNHKKNIKRKAKQAAHGCAEKEASEGVDGNPETSGAVESSPHASSAREQTSNSAGTSKISDADEAKSKEQGNRRGSRQKLLASVDNKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTSADLWSFACICFELATGDVLFDPHSGDNFDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPLTKVLTEKYDFNEKDASDMSDFLVSILDFVPEKRPTAGQCLLHPWMNAGPRTLEPSVPSSNHNPAAETATSDQKNKDKDEREAMEAGMGNIAINSDCKPLMHSPSNKKPLKAAASSSS 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07132 542 ProSiteProfiles Protein kinase domain profile. 40 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g07132 542 MobiDBLite consensus disorder prediction 1 20 - -
Vivi1g07132 542 MobiDBLite consensus disorder prediction 235 249 - -
Vivi1g07132 542 MobiDBLite consensus disorder prediction 283 297 - -
Vivi1g07132 542 MobiDBLite consensus disorder prediction 495 509 - -
Vivi1g07132 542 SUPERFAMILY Protein kinase-like (PK-like) 35 483 IPR011009 -
Vivi1g07132 542 FunFam CMGC/SRPK protein kinase 26 125 - -
Vivi1g07132 542 MobiDBLite consensus disorder prediction 188 300 - -
Vivi1g07132 542 MobiDBLite consensus disorder prediction 475 542 - -
Vivi1g07132 542 Gene3D Transferase(Phosphotransferase) domain 1 123 471 - -
Vivi1g07132 542 Gene3D Phosphorylase Kinase; domain 1 16 122 - -
Vivi1g07132 542 Pfam Protein kinase domain 40 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g07132 542 Pfam Protein kinase domain 302 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g07132 542 MobiDBLite consensus disorder prediction 255 282 - -
Vivi1g07132 542 CDD STKc_SRPK 29 470 - -
Vivi1g07132 542 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Vivi1g07132 542 ProSitePatterns Protein kinases ATP-binding region signature. 46 69 IPR017441 GO:0005524
Vivi1g07132 542 FunFam Serine/threonine-protein kinase SRPK-like protein 300 470 - -
Vivi1g07132 542 SMART serkin_6 40 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g07132 542 MobiDBLite consensus disorder prediction 477 494 - -
Vivi1g07132 542 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 11 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07132 Vivi-Chr1 173070257 173075209 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07132 2 518 EF-hand Containing Proteins AT5G22840 68.330 0.0 747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Vivi1g07132 Pkinase 1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07132 K08832 - gmx:100803070 940.258