Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07110 ATGTTGGTTCCTCCATGGCTCAAACCACTTCTCAACACACCGTTCTTCAATGTCTGCACGATTCACAGCGACTCTACGAGAAGCGAATGTAACATGTTTTGTTTGGATTGTAATGTTGACGCTTTTTGCTTCTATTGTCGATCCTCAAGACACAAAGATCATCAAGTTATTCAAATAAGGAGATCTTCGTATCATGATGTAGTGAGAGTTGGTGAAATTCAGAAAATGTTGGATATTAGTGGAGTCCAAACATATGTGATTAATAGTGCTAGAGTTTTGTTTCTGAATGAAAGGCCACAGCAAAAATCTGGGAAAGTGGGAGCTTATATTTGTGAGATTTGTGGAAGAAGTCTCTTAGACCAAGTTAGGTTCTGTTCTTTGGGATGTAAGCTTGTAGGAATAAAGAGAAATGGGAATGCAAGCTTTGTTTTAGATGCTAATAACAATGGAGTATCAACAATGGAAGAAGGGATGTCAAGAAGAACAATGTCTTCAAGACAAGAAGAAGAGGAATTGCGTGAAGGCTCACAACAAGGCATGTATCAAGTCACACCTTCAAATGCAAGAAGAAGAAAAGGAATTCCTCGTAGAGCTCCTTTTGGATCCTAA 609 0.3875 MLVPPWLKPLLNTPFFNVCTIHSDSTRSECNMFCLDCNVDAFCFYCRSSRHKDHQVIQIRRSSYHDVVRVGEIQKMLDISGVQTYVINSARVLFLNERPQQKSGKVGAYICEICGRSLLDQVRFCSLGCKLVGIKRNGNASFVLDANNNGVSTMEEGMSRRTMSSRQEEEELREGSQQGMYQVTPSNARRRKGIPRRAPFGS 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07110 202 MobiDBLite consensus disorder prediction 151 202 - -
Vivi1g07110 202 MobiDBLite consensus disorder prediction 161 175 - -
Vivi1g07110 202 SUPERFAMILY B-box zinc-binding domain 16 61 - -
Vivi1g07110 202 Pfam PLATZ transcription factor 60 131 IPR006734 -
Vivi1g07110 202 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07110 Vivi-Chr1 172425118 172426880 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vivi1g07110 PLATZ 3.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07110 - - gmx:100809455 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05859 6 166307308 166310342 Vivi1g07110 1 172425118 172426880 PCT