Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07105 ATGGATGACGCAATGATGAACATCATGAACAAAGTGATTTCCAGAACCTCACTCTCCCACACCGACGACCGCACCAAGAAAACGATCATCCTCAGAGCCCTCGAAGACGCCTTGTCGGAAGCATTTATCCCAGAATCTATGCTCGAATTCCTCGAGGTACTAGAGAAACTGTTACTTCATCGCGAATCTTCAAATTCAAATTTAATCAGTGCGGCCATGAAAGCCGCCTATTGTAGCATTGCAGTAGAATCTACCCTCAAGTATCTCGAAGCAGGAACATCAAACCCTAGATACGGAAAAGCGGTGAAGAGGATATGGAAAGGTAAGGTTCATGATATGCAGAGTGAGGGAAGTAGCTTTCTGTTATCTGATGAATTGAAGCAATGGAAAAGTGAGATTGAGAATTCGCTATTGGATGGGGGTGTTTTGGAGAAGCTTGCTTCTATGGGGAGTACTCGAAGAGACGCGATTCGAAAGTTGCGGGCTTTTTTGGCTGAAGCTTGGGAGAATTTAGGTCCTTCTTGA 525 0.4476 MDDAMMNIMNKVISRTSLSHTDDRTKKTIILRALEDALSEAFIPESMLEFLEVLEKLLLHRESSNSNLISAAMKAAYCSIAVESTLKYLEAGTSNPRYGKAVKRIWKGKVHDMQSEGSSFLLSDELKQWKSEIENSLLDGGVLEKLASMGSTRRDAIRKLRAFLAEAWENLGPS 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07105 174 PANTHER MYB TRANSCRIPTION FACTOR 7 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07105 Vivi-Chr1 172330616 172331140 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07105 21 174 Single Myb Histone (SMH) Gene Family AT1G15720 33.121 3.02e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07105 - K11111 vvo:131620368 318.931