Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07103 ATGGAAGACGCAATGGATGACGCAATGATGAACATCATGAACAAAGTGATTTCCAGAACCTCACTCTCCCACACCGACGACCGCACCAAGAAAACGATCATCCTCAGAGCCCTCGAAGACGCCTTGTCGGAAGCATTTATCCCAGAATCTATGCTCGAATTCCTCGAGGTACTAGAGAAACTCTTACTTCATCGCAACTCTTCAAATTCAAATTTAATCAGTGAGGCCATGAAAGCCGCCTATTGTAGCATTGCAGTAGAATCTACCCTCAAGTATCTCGAAGCAGGAACATCAAACCCTAGATACGGAAAAGCGGTGAAGAGGATATGGAAGGGTAAGGTTCATGATATGCAGAGTGAGGGAAGTAGCTTTCTGTTATCGGATGAATTGAAGCAATGGAAAAGTGAGATTGAGAATTCGCTATTGGATGGGGGAGTTTTGGAGAAGCTTGCCTGTATGGGGAGTACTCGAAGAGACGCTATTCGAAAGTTGCGGGCTTTTTTGGCTGAAGCTTGGGAGAATTTAGGTCTTCTTGAATCGGGGCGAAGAATCAATTGTTAG 561 0.4492 MEDAMDDAMMNIMNKVISRTSLSHTDDRTKKTIILRALEDALSEAFIPESMLEFLEVLEKLLLHRNSSNSNLISEAMKAAYCSIAVESTLKYLEAGTSNPRYGKAVKRIWKGKVHDMQSEGSSFLLSDELKQWKSEIENSLLDGGVLEKLACMGSTRRDAIRKLRAFLAEAWENLGLLESGRRINC 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07103 186 PANTHER MYB TRANSCRIPTION FACTOR 11 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07103 Vivi-Chr1 172298824 172300598 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07103 25 176 Single Myb Histone (SMH) Gene Family AT1G15720 32.903 3.31e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07103 - K11111 vvo:131620368 341.658