Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07073 ATGGCTACTAAAAAAGTTAAAATTGCACGATTTCTGTTGCCGCAACCTCACCGGAGCACGATTTCGCGAACCCTAGCGCCGTCGTCTTCTTCATCTTCACACTTCAACTCAGGAACTTTTGGGAAGACGCGGTCACTAACCTTTGCATCAAATTCGGTTGAAGTTGTTGATACTGGTGCGGCATTGCATTGCTGGTCATCTCCCTCCAATATCATCTCTCTTTTTCTCTCCCTATCCTCTTCTCACTCACCACCATTGTTGTTGCAACTCACCTCTTCTACTACGATTCTTATTGGTCCTTCTGATTGGGAGGATTATTCCAAAGGAAAAGAGGGATCTACAAGATACAGAATTCATAACCTGCCAGAGAATCCAGGTACCCATTTATCATCTAATCAAAGAGATTCTTTCTTTGACTTATTTCAGAGAAAGGAAAAGGGTGCAGATCCATCATTGACCGAGTTCTATTTTCGCACACATCGGAAAAAGGATCAAAGTTGGGTTGGAGTTCATGCTGAATCTGCATATGATAAATTTGAACAGAAAAAGTTGGAGATTTCTTCTCAGAATCCAACTATTCCAGGAGAGGACGAAGCTGATAGTCAACCAACTAATGAAATGCCACCGGATTTGGATATATGGGTAGAGTCGGTTGGAAAGAAGAAAGGGAATAGGGTATTTGGTCTTGGAACCGCATCTAAGACTTTGGTTTCTGTATCAAAGAAACCCTCAAGTCTTTCAAGTGACTCTCAAGAGGTTGATGTTTTGAGAAGTCAAGGCCATGCCTTAAATGCATCGTTGCAAAGACAAGAACAAGAAAAGATGGTGATGAGGCAACAATTGCATCGACAAGAAGAAAAGATGGCCGAAGCGAATAATAAAATTTCATTTTTAATGAATCATTTAGGATTTGTTGGGTCTTCTTCTCATCCACCACAACCCACTAATGAAAATGATCACACAAATGAAGATGTCGTCGATGAAACAGATGAAGAAGACCTTAGTAATGAATTTTGA 1017 0.4061 MATKKVKIARFLLPQPHRSTISRTLAPSSSSSSHFNSGTFGKTRSLTFASNSVEVVDTGAALHCWSSPSNIISLFLSLSSSHSPPLLLQLTSSTTILIGPSDWEDYSKGKEGSTRYRIHNLPENPGTHLSSNQRDSFFDLFQRKEKGADPSLTEFYFRTHRKKDQSWVGVHAESAYDKFEQKKLEISSQNPTIPGEDEADSQPTNEMPPDLDIWVESVGKKKGNRVFGLGTASKTLVSVSKKPSSLSSDSQEVDVLRSQGHALNASLQRQEQEKMVMRQQLHRQEEKMAEANNKISFLMNHLGFVGSSSHPPQPTNENDHTNEDVVDETDEEDLSNEF 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07073 338 Coils Coil 267 301 - -
Vivi1g07073 338 MobiDBLite consensus disorder prediction 302 319 - -
Vivi1g07073 338 MobiDBLite consensus disorder prediction 323 338 - -
Vivi1g07073 338 MobiDBLite consensus disorder prediction 183 206 - -
Vivi1g07073 338 Pfam GIY-YIG domain-containing protein 94 124 - -
Vivi1g07073 338 MobiDBLite consensus disorder prediction 185 199 - -
Vivi1g07073 338 MobiDBLite consensus disorder prediction 302 338 - -
Vivi1g07073 338 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 95 125 IPR038909 GO:0003677|GO:0006355
Vivi1g07073 338 Pfam Plant transposase (Ptta/En/Spm family) 134 232 IPR004252 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07073 Vivi-Chr1 170860026 170864464 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07073 96 128 HRT Transcription Factor Family AT5G56780 51.429 6.46e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07073 - - vvo:131606265 394.43