Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07043 AATGTTCAGAATGCTGGATCTCAAGGGTTCAACCCAGGCTTAATAGTTCTACTTGTTGTTGGAGGGTTGCTATTAACATTCCTCATTGGAAACTTTGTCCTCTACTCTTATGCACAGAAGACTATTCCTCCTAGGAAAAAGAAGCCAGTCTCCTAG 156 0.4167 NVQNAGSQGFNPGLIVLLVVGGLLLTFLIGNFVLYSYAQKTIPPRKKKPVS 51
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07043 51 Pfam DNA binding protein S1FA 6 51 IPR006779 GO:0003677|GO:0005634|GO:0006355
Vivi1g07043 51 PANTHER DNA-BINDING PROTEIN S1FA2 2 51 IPR006779 GO:0003677|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07043 Vivi-Chr1 169574420 169574575 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Vivi1g07043 S1FA 5.6e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07043 - - vvo:131659299 92.4337