Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07005 ATGGAAATTGGGTTGGAGTTTCAGACTTCTAACCGCAATTTATTCGCATGGTGTGTAAGGAAGAAAGGTCCAGTGTATGCATCTGCATTCAGCCCTCTTAACCTTTTGATTGTGGCTATTGCTGCTTCCTTGTTGTTAGATGAGACTCTCTATGTTGGAAGTGTAATTGGAGGTGTGCTAATTGTGGGTGGCTTGTACATGGTGTTATGGGCTAAGAGCAAAGAAACTAACTTCATTGCTCAAGAATTTGAAAGGTCAACTGAGGTTGTTGTTATGTCCAAGACATTAGATCATGACTTGGTCACTGAAGCAGCAATAGCCGAACCAAACAGTAGGAGCAATTCTATTATTACATAG 357 0.409 MEIGLEFQTSNRNLFAWCVRKKGPVYASAFSPLNLLIVAIAASLLLDETLYVGSVIGGVLIVGGLYMVLWAKSKETNFIAQEFERSTEVVVMSKTLDHDLVTEAAIAEPNSRSNSIIT 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07005 118 SUPERFAMILY Multidrug resistance efflux transporter EmrE 13 74 - -
Vivi1g07005 118 PANTHER WAT1-RELATED PROTEIN 14 84 IPR030184 GO:0016020|GO:0022857
Vivi1g07005 118 Pfam EamA-like transporter family 14 69 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07005 Vivi-Chr1 167889135 167889933 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07005 16 75 Nodulin-like Gene Family AT1G68170 61.667 4.08e-22 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07005 - - vvo:131620087 197.593