Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07004 ATGGAAATTGGGTTGGAGTTTCAGACTTCTAACCGCAATTTATTCGGGAATTTTGACATCTGGATTAGTGTTGTGACAGCATGGTGTGTAAGGAAGAAAGGTCCAGTGTATGCATCTGCATTCAGCCCTCTTAACCTTTTGATTGTGGCTATTGCTGCTTCCTTGTTGTTAGATGAGACTCTCTATGTTGGAAGTGTAATTGGAGGTGTGCTAATTGTGGGTGGCTTGTACATGGTGTTATGGGCTAAGAGCAAAGAAACTAACTTCATTGCTCAAGAATTTGAAAGGTCAACTGAGGTTGTTGTTATGTCCAAGACATTAGATCATGACTTGGTCACTGAAGCAGCAATAGCCGAACCAAACAGTAGGAGCAATTCTATTATTACATAG 390 0.4077 MEIGLEFQTSNRNLFGNFDIWISVVTAWCVRKKGPVYASAFSPLNLLIVAIAASLLLDETLYVGSVIGGVLIVGGLYMVLWAKSKETNFIAQEFERSTEVVVMSKTLDHDLVTEAAIAEPNSRSNSIIT 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07004 129 SUPERFAMILY Multidrug resistance efflux transporter EmrE 25 85 - -
Vivi1g07004 129 PANTHER WAT1-RELATED PROTEIN 23 95 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07004 Vivi-Chr1 167889089 167889926 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07004 25 86 Nodulin-like Gene Family AT1G68170 61.290 3.47e-22 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07004 - - vvo:131620087 229.18