Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06994 ATGCTTATTAGTTCTTTAGTTGGGAAGGTACAAAAGAGTTTACTACTCTTTGTACCAAGAAAGCATGCATTGAGTTACTGGAATGAAGATCATGCCATAACTACAAGTGAGTTGGCTGATGATGTTATGAAAGGCTACTTTGCTGTTCTTGCAAGGAAGGGTGATGAGACTAGAAGGTTTATTGTTGGGTTAGATTACTTAACAGATCCTGCTTTTGTGGGATTGCTTGATGAAGCTTGGGAGGAGTATGGTTTCAGACAGAAGGGAACTCTTGTTGTTCCGTGTCGGCCGATGGAGTTGCAGAACATTCTAGATGGCCGGAAAACATAG 330 0.4152 MLISSLVGKVQKSLLLFVPRKHALSYWNEDHAITTSELADDVMKGYFAVLARKGDETRRFIVGLDYLTDPAFVGLLDEAWEEYGFRQKGTLVVPCRPMELQNILDGRKT 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06994 109 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 30 102 IPR003676 GO:0009733
Vivi1g06994 109 Pfam Auxin responsive protein 36 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06994 Vivi-Chr1 167516292 167516851 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06994 28 96 Calmodulin-binding Proteins AT3G43120 42.029 4.91e-12 57.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04154 6 140546860 140547666 Vivi1g06994 1 167516292 167516851 PCT