Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06993 ATGCTTAGTTCTTTTGTTGGGAAGGTACAAAAGAGTTTATCGCTCTTTGTACCAAGAAAGCATGCATTGAGTTACTGGAATGAAGATCATGCCACAAGAACAAGTGAGTTGGCTGATGATGTAATGAAAGGCTACTTTGCTATTCTTGCAAGGAAGGGTGATGAAACAAGAAGGTTTATTGTTCGGTTGGATTACTTAACTGATCCTGCTTTTGTGGGATTGCTTGATGAAGCTTGGGAGGAGTATGGTTTCAGACAGAAGGGAACTCTCGTTGTTCCGTGCCGGCCGATGGAGTTGCAGAACATTCTAGATGGTCGGAAAACATAG 327 0.4251 MLSSFVGKVQKSLSLFVPRKHALSYWNEDHATRTSELADDVMKGYFAILARKGDETRRFIVRLDYLTDPAFVGLLDEAWEEYGFRQKGTLVVPCRPMELQNILDGRKT 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06993 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 29 101 IPR003676 GO:0009733
Vivi1g06993 108 Pfam Auxin responsive protein 33 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06993 Vivi-Chr1 167491563 167492100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06993 27 95 Calmodulin-binding Proteins AT3G43120 40.580 3.69e-12 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06993 - K14488 tpra:123895443 184.882