Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06991 ATGGTTCATTCTTTTGTTGGAAAGATCCAAAAGGGTATTTCACACTTTGTACACAAAAGGAACGGTTTGAGTAAAGAGTTGGTGGCAGAAGAAGTTAGGGAAGGATATTTTGCTGTTGTTGCAGTGAAGGATGGAGAACTAAAAAGGTTTATCATTGGATTGGAGTACTTGAGTGATCCTGAATTTTTGGAACTACTCGATCAAGCTCAAGAAGAGTATGGTTTCATACAGAAAGGAGCTATTTTTATCCCTTGTCGGCCTCAACAATTTCAAACCATTTTAGATAGTCAGAGAGATGAGCATTAG 306 0.3791 MVHSFVGKIQKGISHFVHKRNGLSKELVAEEVREGYFAVVAVKDGELKRFIIGLEYLSDPEFLELLDQAQEEYGFIQKGAIFIPCRPQQFQTILDSQRDEH 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06991 101 Pfam Auxin responsive protein 27 95 IPR003676 GO:0009733
Vivi1g06991 101 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 24 92 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06991 Vivi-Chr1 167465193 167465498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06991 31 94 Calmodulin-binding Proteins AT3G43120 45.312 1.18e-10 53.1