Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06990 ATGGTTCATTCTTTTGTTGGGAAGATCCAAAAGGGTATTTCACACTTTGTACACAAAAGGCACGGATTGAATGAAGAGTTGGTGGTGGCAGAAGAAGTTAGGGAAGGATATTTTACTGTTATTGCAGTGAAGGATGGAGAAATAAAAAGGTTTATCATTGGATTGGAGTACTTGAGTGATCCTGAATTTTTGGGACTACTCGATCAAGCTCGTGAGGAGTATGGTTTCATACAGAAAGGAGCTATTTTTGTCCCTTGTCGGCCTCAACAATTACAGACCATTTTAGATGGCCAGAGATGA 300 0.4 MVHSFVGKIQKGISHFVHKRHGLNEELVVAEEVREGYFTVIAVKDGEIKRFIIGLEYLSDPEFLGLLDQAREEYGFIQKGAIFVPCRPQQLQTILDGQR 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06990 99 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 22 93 IPR003676 GO:0009733
Vivi1g06990 99 Pfam Auxin responsive protein 29 95 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06990 Vivi-Chr1 167442442 167442741 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06990 32 95 Calmodulin-binding Proteins AT3G43120 39.062 5.08e-08 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06990 - K14488 gmx:100776513 133.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g06990 1 167442442 167442741 Vivi1g06990 1 167442442 167442741 ECH