Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06988 ATGGTTCATTCTTTTGTTGGGAAGATCCAAAAGAGTATTTCACACTTTGTACACAAAAGGCACGGATTGAATAAAGTGTTGGTGGTGGCAGAAGAAGTTAGGGAAGGATATTTTGCTGTTGTTGCAGTGAAGGATGGAGAACTAAAAAGGTTTATGATTGGATTGGAGTACTTGAGTGATCCTGAGTTTTTGGGACTACTCGATCAATCTCGTGAAGAGTATGGTTTCATACAGAAAGGAGCTATTTTTGTCCCTTGTCGGCCTCAACAATTACAGACTATTTTAGATGGTCAGAGATGA 300 0.3933 MVHSFVGKIQKSISHFVHKRHGLNKVLVVAEEVREGYFAVVAVKDGELKRFMIGLEYLSDPEFLGLLDQSREEYGFIQKGAIFVPCRPQQLQTILDGQR 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06988 99 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 22 93 IPR003676 GO:0009733
Vivi1g06988 99 Pfam Auxin responsive protein 29 95 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06988 Vivi-Chr1 167426245 167426544 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06988 32 95 Calmodulin-binding Proteins AT3G43120 39.062 3.72e-08 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06988 - K14488 gmx:100775971 130.183