Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06973 ATGACTTCCCAAGTAGCTCCCCACACATTCTCTCAACCAGACACCAAAACCTCCACCGCCGTAACCACCACAGATTCCGATCCCAATCACCATCTCTCCACCGTTCGCAGAACTTCCACCACCGCCTCACGATCCACCAAAGATCGTCACACTAAGGTTAACGGCCGTGGTCGCCGTGTGCGTATGCCGCCTCTCTGCGCCGCGAGGATATTCCAGCTTACACGCGAACTCGGCCACCGCTCCGACGGTGAAACCATCGAGTGGCTCCTCCGACACGCTGAGCCGTCTATTATCGCTGCTACCGGTACTGGCACTGTTCCCGCTGATCCTGTCTCGACTGTCTCACCGGTTTCGCCCTCGACTGTGCCGTCTGTGTCGTGCAATGTTCACCCGGTGTCTTCGGTTGGTCACGGTAGTCAAGGCGTGTTTGCTGCGGTACAGCAGCCGAGCTGCCGGCTTGACCTCTGTCAGCCTTCTGGAATGGACTACGCGGCGGCGGAGAATAGATACCGGCATATGCCGTTCACGGCTTTGCTGTTGCAACCGACTACTGTGGAGGAGAATCAGCAAGAGGAAGCTCTGAGTGAACAATGA 594 0.5741 MTSQVAPHTFSQPDTKTSTAVTTTDSDPNHHLSTVRRTSTTASRSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRHAEPSIIAATGTGTVPADPVSTVSPVSPSTVPSVSCNVHPVSSVGHGSQGVFAAVQQPSCRLDLCQPSGMDYAAAENRYRHMPFTALLLQPTTVEENQQEEALSEQ 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06973 197 MobiDBLite consensus disorder prediction 1 58 - -
Vivi1g06973 197 ProSiteProfiles TCP domain profile. 46 100 IPR017887 -
Vivi1g06973 197 MobiDBLite consensus disorder prediction 1 41 - -
Vivi1g06973 197 Pfam TCP family transcription factor 45 135 IPR017887 -
Vivi1g06973 197 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 17 134 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06973 Vivi-Chr1 167077814 167078862 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06973 46 184 TCP Transcription Factor Family AT2G37000 58.273 1.27e-43 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Vivi1g06973 TCP 1.9e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06973 - - cam:101510590 276.559