Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06963 ATGAAGTCAAGATTCTTGAGAGGGTGTATCAACAAATGCAAGAAAATGGGAAGCATAGCAAAAACATGTGCCACTTGTGAAGATATTTGTGAAAGAGGTTTATGGCTATCCCTACATGAGAGTTGCTCTATTCCAAGTGATGTTCCAAAGGGTCACATGGTTGTATATGTTGGTGAGAATCACAAGAGATATGTCATCAAAATTGCATTGCTTCATCATCCACTTTTTAGAGCCTTGTTGGATCAAGCTCAAGAAGAGTATGATTTTAGTACTGATTCAAAACTATGTATTCCTTGTGATGAACATCTTTTTCTCAATGTTCTTCGTTGTGCTGGTTCTCCACAGAATCAAGGGGTGTGTTTGTGTCTCTGA 372 0.3817 MKSRFLRGCINKCKKMGSIAKTCATCEDICERGLWLSLHESCSIPSDVPKGHMVVYVGENHKRYVIKIALLHHPLFRALLDQAQEEYDFSTDSKLCIPCDEHLFLNVLRCAGSPQNQGVCLCL 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06963 123 Pfam Auxin responsive protein 41 110 IPR003676 GO:0009733
Vivi1g06963 123 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 27 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06963 Vivi-Chr1 166808448 166809071 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06963 46 108 Calmodulin-binding Proteins AT4G34750 53.968 3.54e-21 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06963 K14488 - gmx:100812927 209.534