Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06935 ATGGCATCCAACAGGGGTCAAGGAGGAATTCAGCAATTGTTGGCTGCTGAACAAGAAGCACAACGGATTGTGAATGCTGCAAAAAATGAAAAATCGGCTAGGTTGAAACAGGCCAAAGAAGAGGCTGAAAAGGAGATTGCTGAATACCGTGCCAAGCTTGAGTCTGAGTTTCAAAAGAAAGTTTCAGATAGTAGTGGTGACTCTGGAGCTAATGTTAAGCGACTTGACCAAGAAACCGAAGAAAAAATCCATCACCTGAAAGAAGAGGCTGCAAGAATTTCAGAGGATGTTGTTGCCATGCTCCTTAAATATGTAACAACTGTGAAAAAGTAG 333 0.4204 MASNRGQGGIQQLLAAEQEAQRIVNAAKNEKSARLKQAKEEAEKEIAEYRAKLESEFQKKVSDSSGDSGANVKRLDQETEEKIHHLKEEAARISEDVVAMLLKYVTTVKK 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06935 110 Coils Coil 10 59 - -
Vivi1g06935 110 MobiDBLite consensus disorder prediction 57 76 - -
Vivi1g06935 110 NCBIfam V-type ATPase subunit G 3 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Vivi1g06935 110 FunFam V-type proton ATPase subunit G 3 110 - -
Vivi1g06935 110 Coils Coil 76 96 - -
Vivi1g06935 110 Gene3D - 1 110 - -
Vivi1g06935 110 Pfam Vacuolar (H+)-ATPase G subunit 7 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Vivi1g06935 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 110 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06935 Vivi-Chr1 165322958 165327101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06935 1 109 Primary Pumps ATPases(2) AT3G01390 74.312 1.66e-43 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06935 K02152 - gmx:100306550 185.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g06935 1 165322958 165327101 Vivi1g06935 1 165322958 165327101 ECH